| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1497 |
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| Symbol | |
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| ID | 5053336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1573812 |
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| End bp | 1575101 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640471670 |
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| Product | polyhydroxyalkanoate depolymerase, intracellular |
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| Protein accession | YP_001156275 |
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| Protein GI | 145589678 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
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| TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTATATC AGTTACATGA ATTTCAAAAA GCCTTACTTC AACCAGTAAG CTCATGGGCG
CGCGCAGCCT CAGAAGCTTT TATTAATGCT TCAAACCCAG CCTCCAAGGT TCCCGGTTCA
GAGCGTTTAG CGGCCAGCTA TGAATTACTC TATCGCTTAG GTAAAAACTA CAAAAAGCCA
GAGTTTGGAA TTCGCTCAGT GATGGCGCAT GGCCGTGAAG TAGCTATTCA TGAAAGAACG
GCTGTTGCAA AACCGTTTTG CAACTTAGTT CGCTTCAAGC GTTTCTCCGA TGATGTTGAA
GTCATCAAAA AGCTTAAAGA AGATCCGGTT GTTTTAGTGG TCGCGCCCAT GTCTGGACAT
CACTCCACAT TATTGCGTGA TACCGTTCGC ACCCTTTTGC AAGATCACAA GGTTTACATT
ACCGACTGGA TTGATGCACG CCTAGTTCCA CTTGAAGATG GTGAATTTGG TTTAGATGAC
TATGTGCACT ATGTTCAAGA ATTTATTCGC ACGATTGGCG CAGAAGATCT GCACGTCATT
TCCGTATGCC AACCAACAGT ACCCACATTA GGCGCAATTT CTTTGATGGC TTCTGCTGGT
GAGAAAACGC CTGCATCCAT GATCATGATG GGCGGTCCGA TTGATGCTCG TAAATCACCT
ACTGCGGTGA ACAACTTAGC CGAACAAAAA TCACATGAGT GGTTTGAGAG TCATGTGATT
TATAACGTGC CACCAAATTA CCCAGCAGCA GGCCGTCGCG TGTATCCAGG CTTCTTGCAA
CACACTGGCT TTATTGCCAT GAACCCACAA AACCACTTGC AGTCTCACTG GGATTATTTC
CAGAACTTGG TGCGTGGTGA TGAGCAAGAT GCTGAATCAC ATATTCGCTT CTACGATGAG
TACAACGCGG TATTAGATCT TGATGCCAAA TTCTATCTAG ACACCATCAA AACAGTATTC
CAAGACTATT CATTACCAAA TGGTACATGG GAAGTTTCTG GAAAATTAGT GAAGCCTCAA
GATATTAAGA AGACTGCACT TCTCACAGTT GAGGGTGAGT TGGATGATAT TTCTGGCAGT
GGTCAGACCC GCTCAGCACA TGCTTTATGT GCAGGTATTC CAAAAGAGCA TAAAGATCAT
TATGAAGTTG CTGGTGCTGG TCACTACGGC ATCTTTGCTG GTCGTCGTTG GCGTGAAAAG
GTTTATCCAA AAATTAAATC CTTTATTCGT GAACATCATC CGGCCCAAAG AAAAACCAAA
GCGCGCCTAC CAAAGTTAGA CGCGAAGTAA
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| Protein sequence | MLYQLHEFQK ALLQPVSSWA RAASEAFINA SNPASKVPGS ERLAASYELL YRLGKNYKKP
EFGIRSVMAH GREVAIHERT AVAKPFCNLV RFKRFSDDVE VIKKLKEDPV VLVVAPMSGH
HSTLLRDTVR TLLQDHKVYI TDWIDARLVP LEDGEFGLDD YVHYVQEFIR TIGAEDLHVI
SVCQPTVPTL GAISLMASAG EKTPASMIMM GGPIDARKSP TAVNNLAEQK SHEWFESHVI
YNVPPNYPAA GRRVYPGFLQ HTGFIAMNPQ NHLQSHWDYF QNLVRGDEQD AESHIRFYDE
YNAVLDLDAK FYLDTIKTVF QDYSLPNGTW EVSGKLVKPQ DIKKTALLTV EGELDDISGS
GQTRSAHALC AGIPKEHKDH YEVAGAGHYG IFAGRRWREK VYPKIKSFIR EHHPAQRKTK
ARLPKLDAK
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