Gene Pnuc_1490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1490 
Symbol 
ID5052639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1567004 
End bp1567531 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content45% 
IMG OID640471663 
Productco-chaperone Hsc20 
Protein accessionYP_001156268 
Protein GI145589671 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1076] DnaJ-domain-containing proteins 1 
TIGRFAM ID[TIGR00714] Fe-S protein assembly co-chaperone HscB 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGAATC ATTCCGCGTC TGACGATTAC TTTCGTTTCT TTGGATTAAA TCAGCAATTC 
ACCATTGATT TGCCTGCCTT AGATCAGGCA TATCTTGCAA TACAGAAAGA AGTTCATCCA
GATCGTCATG CTCGTGGCAG TGAAACGGAT CAACGCCTCG CCATGCAAAT GGCCACTCTA
GCCAATACCG CTTTTCAAAC TCTAAAAAAT CCCATACAGC GTGGCTTATA TCTATGCCAA
CTTCATGGTG TAGACGCAAA GCTAGAAACT AATACTGCAA TGCCAGCAGC TTTCCTTATG
AAGCAAATGG AATGGCGCGA GAATCTGGAT GAGCAAGCAG AAGATTTGCC AGCTCTAGAG
TCCTTGATGG CTGAGGTTGA GCAATCTAAG ACTGATACCC TTGCTGAGAT TACTCAAGCC
ATCGATGGGG CTAAAAATTA TCAGCGCGGA GCAGAGCTTT TGCGCGGCTT GTTGTTTATC
GATAAGTTTG CCGTTGAGCT TGATGACACT ATTGCGGCCC TGATTTAG
 
Protein sequence
MANHSASDDY FRFFGLNQQF TIDLPALDQA YLAIQKEVHP DRHARGSETD QRLAMQMATL 
ANTAFQTLKN PIQRGLYLCQ LHGVDAKLET NTAMPAAFLM KQMEWRENLD EQAEDLPALE
SLMAEVEQSK TDTLAEITQA IDGAKNYQRG AELLRGLLFI DKFAVELDDT IAALI