Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1490 |
Symbol | |
ID | 5052639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 1567004 |
End bp | 1567531 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640471663 |
Product | co-chaperone Hsc20 |
Protein accession | YP_001156268 |
Protein GI | 145589671 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1076] DnaJ-domain-containing proteins 1 |
TIGRFAM ID | [TIGR00714] Fe-S protein assembly co-chaperone HscB |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCGAATC ATTCCGCGTC TGACGATTAC TTTCGTTTCT TTGGATTAAA TCAGCAATTC ACCATTGATT TGCCTGCCTT AGATCAGGCA TATCTTGCAA TACAGAAAGA AGTTCATCCA GATCGTCATG CTCGTGGCAG TGAAACGGAT CAACGCCTCG CCATGCAAAT GGCCACTCTA GCCAATACCG CTTTTCAAAC TCTAAAAAAT CCCATACAGC GTGGCTTATA TCTATGCCAA CTTCATGGTG TAGACGCAAA GCTAGAAACT AATACTGCAA TGCCAGCAGC TTTCCTTATG AAGCAAATGG AATGGCGCGA GAATCTGGAT GAGCAAGCAG AAGATTTGCC AGCTCTAGAG TCCTTGATGG CTGAGGTTGA GCAATCTAAG ACTGATACCC TTGCTGAGAT TACTCAAGCC ATCGATGGGG CTAAAAATTA TCAGCGCGGA GCAGAGCTTT TGCGCGGCTT GTTGTTTATC GATAAGTTTG CCGTTGAGCT TGATGACACT ATTGCGGCCC TGATTTAG
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Protein sequence | MANHSASDDY FRFFGLNQQF TIDLPALDQA YLAIQKEVHP DRHARGSETD QRLAMQMATL ANTAFQTLKN PIQRGLYLCQ LHGVDAKLET NTAMPAAFLM KQMEWRENLD EQAEDLPALE SLMAEVEQSK TDTLAEITQA IDGAKNYQRG AELLRGLLFI DKFAVELDDT IAALI
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