Gene Pnuc_1489 details

Gene Information

• Locus tag: Pnuc_1489
• Symbol: hscA
• ID: 5053313
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1
• Kingdom: Bacteria
• Replicon accession: NC_009379
• Strand: -
• Start bp: 1565110
• End bp: 1566975
• Gene Length: 1866 bp
• Protein Length: 621 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640471662
• Product: chaperone protein HscA
• Protein accession: YP_001156267
• Protein GI: 145589670
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR01991] Fe-S protein assembly chaperone HscA

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTTTAT TACAAATTTC AGAACCCGGT AAGTCACTAG CGCCTCACCA GCGCCGTATT 
GCTGTTGGCA TTGATTTGGG CACGACCAAT TCATTAGTGG CCATTGTTCA AGATGCTTTA 
CCAAAAGTGT TGCCTGACGA ACAGGGGCGT GAACTACTTC CTTCGGTTGT TCGTTATTTA 
CCCAATGGGC GAACCCAGGC GGGTTTTGAA GCGCTTGAGA GTGTAGTGAT TGATCCCAAG 
AATACGATTC TTTCAGTAAA GCGTTTTATG GGGCGCGGCA TAAGCGATGT TGAGAATATT 
GAAAGTGCTC CCTATGACTT TGTTGATCAG CCTGGCATGC TTAAGCTGAG AACAGTTGCT 
GGTGACAAAA GCCCTATTGA AGTTTCCGCT GAAATCTTAG CGCGTTTACG CCAGCTAGCC 
GAAGATTCTG TTAATGATGA CATCGTTGGC GCTGTGATTA CAGTTCCAGC CTATTTTGAT 
GATGCGCAGA GACAAGCAAC CAAAGATGCT GCTAAGTTGG CTGGTATTGA AGTGTTGCGA 
TTGCTTAATG AGCCTACTGC CGCAGCGATT GCATATGGCT TAGATAACGC TACAGAAGGT 
GTGTACGCAG TTTATGACTT AGGTGGCGGT ACTTTTGACA TCTCCATATT GCGCATGAGC 
AAGGGTGTCT TTGAAGTACT CTCTACTGGT GGCGACTCTG CCTTAGGTGG AGATGACTTT 
GATCATCGCT TGTATTGCTG GGTAATCGAG CAAGCCAAGT TGCCCCCATT GTCGATACAT 
GATCATCGCA CCTTATTGCA GGCATGTAAG CATGCCAAAG AGTTGCTGAG CCATAACCCA 
CTGGCACGAG TTCATGAGAC GCTAGCAGAC GGTACAGTAG TCAATGTCGG TATAAGCCAA 
GCTCAGTTAT TTGAGATTAC ACAGAACTTA GTGAGTAAGA CCTTGGTAGC CTGCAAAAAA 
GCATTACGCG ATGCTGGTTT AAAAGCAGAA GATATTAAAG GCGTTGTGAT GGTGGGTGGC 
TCCACGCGGA TGCCTAATGT GCAGCGCGCT GTAGGCGAGT TGTTTGGTAC AAAGCCCTTA 
AATAATCTCA ATCCAGATCA AGTGGTTGCC TTAGGTGCTG CGATGCAAGC AGACTTATTG 
GCTGGTAATC AAAGTAAGGA TGACGAGTGG TTGTTGTTAG ATGTCATTCC GCTTTCACTT 
GGCATTGAAA CCATGGGTGG CTTGGTAGAA AAAATTATTC CTCGCAATAC TCCTATCCCA 
GTTGCTAGAG CGCAAGATTT CACCACCTTT AAAGATGGTC AAACTGCATT AGCAATTCAG 
GTGGTGCAGG GTGAACGCGA ATTAGCGCAA GATTGCCGCT CCTTAGGGCG CTTTGAGTTG 
CGCGGTATTC CACCGATGGC AGCCGGCGCA GCCCGTATTC GGGTGACTTT CCAGGTCGAT 
GCTGATGGCC TTTTATCGGT AAGCGCTACG GAAATAGGTT CCGGCGTGAA AGCCTCTATC 
GATATTAAGC CTTCCTATGG TTTAACTGAT GGCGAGATTA CTCGTATGCT TCAAGAAGGT 
TTCTCATCAG CAAAAGAAGA TTTATTGGCA AGATCGTTGC GTGAAGAACA AGTGAGTGCA 
CAGCGCTTAT TAGATGCAGT GCAAACAGCT TTAAGTACGG ATCGCGCATT ACTTAATGAG 
CAAGAGCAAG CAGCCATTGA TCAAGAGATG GCTCAGTTGC AAAAGATTTT GAATGAAGAA 
ACTGATAGTT CAGTTGTTCG CAAAGCAGTT GATCACGCCG CTAAAGCAAC CGATGAATTT 
GCCCAAAAGC GTATGAACGC TAGTATTCAA AAAGCACTAT CTGGCAAGAA TGTTGCTGAG 
ATTTAA 

 

Protein sequence

MALLQISEPG KSLAPHQRRI AVGIDLGTTN SLVAIVQDAL PKVLPDEQGR ELLPSVVRYL 
PNGRTQAGFE ALESVVIDPK NTILSVKRFM GRGISDVENI ESAPYDFVDQ PGMLKLRTVA 
GDKSPIEVSA EILARLRQLA EDSVNDDIVG AVITVPAYFD DAQRQATKDA AKLAGIEVLR 
LLNEPTAAAI AYGLDNATEG VYAVYDLGGG TFDISILRMS KGVFEVLSTG GDSALGGDDF 
DHRLYCWVIE QAKLPPLSIH DHRTLLQACK HAKELLSHNP LARVHETLAD GTVVNVGISQ 
AQLFEITQNL VSKTLVACKK ALRDAGLKAE DIKGVVMVGG STRMPNVQRA VGELFGTKPL 
NNLNPDQVVA LGAAMQADLL AGNQSKDDEW LLLDVIPLSL GIETMGGLVE KIIPRNTPIP 
VARAQDFTTF KDGQTALAIQ VVQGERELAQ DCRSLGRFEL RGIPPMAAGA ARIRVTFQVD 
ADGLLSVSAT EIGSGVKASI DIKPSYGLTD GEITRMLQEG FSSAKEDLLA RSLREEQVSA 
QRLLDAVQTA LSTDRALLNE QEQAAIDQEM AQLQKILNEE TDSSVVRKAV DHAAKATDEF 
AQKRMNASIQ KALSGKNVAE I