Gene Pnuc_1484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1484 
Symbol 
ID5052070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1561263 
End bp1562474 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content51% 
IMG OID640471657 
Producthypothetical protein 
Protein accessionYP_001156262 
Protein GI145589665 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGTAT CTAAAAAAGC GGGGCTTCCA TCGCGCTTAT TAGCAGGGCT TTTAACTGCC 
GCACTCAGCA TTCCAGCGAT AGTGCCAGTA GCTTATGCTC AAAATAGCAG TCAGGAGCAA 
GCCGCCAAGC TTTCACAAGC CCAACTAGAG TCATTGGTAG CACCTATAGC GCTTTATCCA 
GACTCACTGT TATCCCAAGT ATTGATGGCA TCCACCTACC CTCTTGAGGT CGCTGAAGCT 
GCTAACTGGC AAAACGCGAA CAAGAATCTG AAAGGCAATC CACTGAATAA CGCATTGCAG 
CAGCAAACCT GGGATGCCAG CGTTAAATCC TTGGTGTCAT TTCCATCAGC TTTACAAATG 
ATGGGCTCCC AACTTAGCTG GACCCAAAAA TTAGGCAACG CCGTATTAGC CCAACAATCA 
GACACAATGG CTGCGATTCA GGCATTGCGC GCTAAGGCAA AACAATCAGG TGCACTGCAG 
TCCACTCAAC AGCAAACAGT TTCAACACAG GGTAGTGGCA GCAGCCAAGC AATCGTGATT 
CAGCCTGCTG ACCCACAGAT TGTTTATGTG CCGGCCTACA ACCCGACTGT AGTTTATGGC 
GCATGGCCTT ACCCAAGCTA CCCTCCATAC ACTTACTATC CACCAGGATA TGTAGCTGGC 
ACAGCCTTAC TGTCCTTTGG TGTCGGTATG GCAGTAGGTG CTGCACTCTG GGGTGGCTGT 
CATTGGGGTG GCGGATATGG TGGCGGCAAT TCACTTACCG TGAACAACAA CACCTACAAC 
AACTTCAATA GAAACACCAA TCGCAATTGG TCTGGAAACA GTCGTGGCAC CAGTGACTGG 
AAACCCGATC AGCAACGTCG CAATGCCAAT ATTAGCGGCG GAAACCAAAA TGCAGAACGC 
GATCAATTAC GTCAAAACCT CCAAAAAGAT GGTCTCAATG GCGGTGATCG CGGCGGCAAC 
AATGGTAGTG ACCGCGCTGG CAACAACCGT AGCGATGTAG ATCGCCCAGA TGCAAGCCGT 
GATGGAGATC GTAATTTAGG CGATCGTAAT GGCGGACAAA GTAATTTCCG AAATGACTCT 
AGCGGCTTTG GCGATGCTCG TGGCGCTAAA TTTAATGGTG GTGATGATCG TTTTGGCGGG 
GGTGGCGCGC ACATTGGTGG CGGTGGCGAA CACTTTGGTG GTGGCGGTGG TGGCTTTCGC 
GGTCGTCGTT AA
 
Protein sequence
MQVSKKAGLP SRLLAGLLTA ALSIPAIVPV AYAQNSSQEQ AAKLSQAQLE SLVAPIALYP 
DSLLSQVLMA STYPLEVAEA ANWQNANKNL KGNPLNNALQ QQTWDASVKS LVSFPSALQM 
MGSQLSWTQK LGNAVLAQQS DTMAAIQALR AKAKQSGALQ STQQQTVSTQ GSGSSQAIVI 
QPADPQIVYV PAYNPTVVYG AWPYPSYPPY TYYPPGYVAG TALLSFGVGM AVGAALWGGC 
HWGGGYGGGN SLTVNNNTYN NFNRNTNRNW SGNSRGTSDW KPDQQRRNAN ISGGNQNAER 
DQLRQNLQKD GLNGGDRGGN NGSDRAGNNR SDVDRPDASR DGDRNLGDRN GGQSNFRNDS 
SGFGDARGAK FNGGDDRFGG GGAHIGGGGE HFGGGGGGFR GRR