| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1474 |
|---|
| Symbol | |
|---|
| ID | 5052302 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | - |
|---|
| Start bp | 1552792 |
|---|
| End bp | 1553283 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640471647 |
|---|
| Product | OmpA/MotB domain-containing protein |
|---|
| Protein accession | YP_001156252 |
|---|
| Protein GI | 145589655 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAAAT TTGTAAAAGT ATTGCCTTTG GCAATATTGG TTTTATTTAT GTCTGCGTGT
AGTAGCGTTA AGTTAGACGA CACCAATGGA GTCGCCTCTG TAAATGGTGG AAGTTCTATG
ACTTACGATC CAATAAGTGA CCCTAGGTCT AGTGTTTACA ATAAGCGTTC AATCTATTTT
GATTTTGATA GCTATACCAT CGACCCAAAA TATGCTTCAA CGGTCTCAGC ACATGCCTCT
TACTTAAAAT CATTTCAAAA GCAAAAGGCG TCGATCATTA TTCAAGGCAA CACCGATGAT
CGCGGAACTG CTGAGTACAA CTTGGCTCTC GGTCAAAAGC GATCTGAGGC GGTTAAGAAA
GCTTTGCTTG TACAGGGCGT TAGCGAGTCT CAATTGGAGT CGGTGAGCTT TGGAAAAGAA
AAACCAGCTA ATCCAGCCCA GACAGATGCG GCATTCCAAG AAAATCGCCG CGCTGATTTT
GTCTACCAAT AG
|
|---|
| Protein sequence | MFKFVKVLPL AILVLFMSAC SSVKLDDTNG VASVNGGSSM TYDPISDPRS SVYNKRSIYF
DFDSYTIDPK YASTVSAHAS YLKSFQKQKA SIIIQGNTDD RGTAEYNLAL GQKRSEAVKK
ALLVQGVSES QLESVSFGKE KPANPAQTDA AFQENRRADF VYQ
|
|---|
| |