| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1472 |
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| Symbol | lysS |
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| ID | 5052946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1550254 |
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| End bp | 1551798 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640471645 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_001156250 |
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| Protein GI | 145589653 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGATA AAACGAATCC AGCCCCAGCT ACCGAAGTAG TTGATGAAAA TCACATCATT
GCAGAGCGTC GTGAAAAACT CGCTAAGCTT CGTGAGAATG GCATCGCCTT TCCAAATGAT
TTTGTACCAA CCCATTTGGC CGTTGATTTA CACGCGCACT ATGACAGCCT CACTAAAGAA
GAGCTTGCTG CCAAGAAAAT TCACGTCAAA GTAGCCGGCC GCATGGTGCT TAAGCGCGTC
ATGGGTAAAG CCAGCTTTGC AACGATTCAA GATCGCAGCG GACAAATCCA GTTTTATATT
AATGATGAAA TTAGCGGCGC TGATACCCAC GGGGCTTTTA AGCACTGGGA TATGGGTGAT
TTTATTTCGG CTGAAGGCAA TCTCTTTAAG ACCAATAAAG GTGAATTATC AGTAGAGTGC
AGCAATTTAC GCCTGCTCAG CAAGTCCTTG CGCCCATTGC CAGATAAGTT CCACGGCCTC
TCAGACCTAG AGACTAAGTA TCGCCAGCGC TATGTGGATT TAATTGTGAA TCCAGAAAGT
CGCAATACTT TTAAAGCACG TAGTAATGCG ATCGCTTCAT TGCGTCGCCA TATGCTTGAT
GCTGACTTCA TGGAAGTCGA AACGCCAATG CTCCACCCTA TTCCTGGTGG CGCCACTGCA
AAACCATTTA TCACGCACCA CAATGCGCTC GACATGCAAA TGTTCTTGCG TATCGCTCCT
GAGCTCTACT TAAAGCGCTT GGTAGTTGGT GGCTTTGAAC GTGTCTTTGA AATTAACCGC
AACTTCCGTA ACGAAGGTGT GAGCCCGCGC CACAATCCAG AATTTACGAT GATGGAATTC
TACGCAGCCT ATACCGATTA CCGTTGGCTC ATGGATTTCA CTGAAGGCCT CATTCGTGCA
GCCGCAGTCG ATGCCCAAGG CACTGCAGTT CTAACTCACC AAGGTCGTGA ATTGGATCTC
AGTAAACCAT TCCAACGCTT GACGATTAAT GAAGCCATCC TCAAGTACTG CGCTCAATCT
GGTAAGAGCT ATGAAGCTAT CCAGTTAGAT GATGCAGACT TCATTCGCGC AGAATTGAAA
AAAGGTGGTG AGAATCCAGA TTCCCCCACC CTCAAGAATG CGGGTATTGG CGCTTTGCAA
TTGGCCTTGT TTGAGCTGGT CGCAGAATCG CATCTATGGG AACCAACCTA CATCATTGAT
TACCCAATTG AAGTAAGCCC GCTGGCTCGT GAATCTGATA CACGCCCAGG TATTACAGAG
CGTTTTGAGC TATTTATTAC TGGTCGCGAA ATTGCTAATG GTTTCTCCGA GTTAAATGAT
GCAGAAGATC AAGCCAATCG TTTCCGCAAG CAAGTAGAGC AAAAAGAAGC GGGTGATGAG
GAGGCTATGT ATTTTGATCA TGACTTCATT CGCGCCCTAG AATACGGTAT GCCTCCGACG
GGTGGTTGCG GTATTGGTAT CGACCGCTTG GTCATGCTTC TCACTGATGC ACCAAATATT
CGTGACGTCA TTCTCTTCCC ACATTTGCGT CGCGAAGAAG AATAA
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| Protein sequence | MNDKTNPAPA TEVVDENHII AERREKLAKL RENGIAFPND FVPTHLAVDL HAHYDSLTKE
ELAAKKIHVK VAGRMVLKRV MGKASFATIQ DRSGQIQFYI NDEISGADTH GAFKHWDMGD
FISAEGNLFK TNKGELSVEC SNLRLLSKSL RPLPDKFHGL SDLETKYRQR YVDLIVNPES
RNTFKARSNA IASLRRHMLD ADFMEVETPM LHPIPGGATA KPFITHHNAL DMQMFLRIAP
ELYLKRLVVG GFERVFEINR NFRNEGVSPR HNPEFTMMEF YAAYTDYRWL MDFTEGLIRA
AAVDAQGTAV LTHQGRELDL SKPFQRLTIN EAILKYCAQS GKSYEAIQLD DADFIRAELK
KGGENPDSPT LKNAGIGALQ LALFELVAES HLWEPTYIID YPIEVSPLAR ESDTRPGITE
RFELFITGRE IANGFSELND AEDQANRFRK QVEQKEAGDE EAMYFDHDFI RALEYGMPPT
GGCGIGIDRL VMLLTDAPNI RDVILFPHLR REEE
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