| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1467 |
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| Symbol | |
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| ID | 5052811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1544339 |
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| End bp | 1545037 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640471640 |
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| Product | ABC transporter related |
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| Protein accession | YP_001156245 |
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| Protein GI | 145589648 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAGG ATATGAATTC ATTTGTTTTG GTGGCCAAGG GTTTGGTGAA GACTTATGGC
CAAGGACCTA CTGCTGTGGA TGTTCTCAAG TCGGTTGACT TAGAGGTATC CCTATCTGAG
AAGGTGGCCA TTGTTGGATC ATCTGGCTCT GGAAAAAGTA CGCTTTTGCA CCTCTTGGGC
GGTCTTGATA CCCCAAGCGC CGGTTCCGTG ATGTTGGCGG GCTCCAACCT CAGTACATTA
TCCGTTGCAA AGTTGGACCG CCTGCGCAAT CACAGTTTGG GCTTTATCTA TCAGTTCCAT
CATCTTTTGG ATGAATTTAG TGCAGCAGAA AACGTTGCTT TACCGTTGCG TATTCGTGGG
CTAAGCAATG AAGAGTCCAT GGATCGTGCT AGCAAAATAC TTAAGGCCGT TGGTTTAGCC
TCACGAGAGT TGCATACGCC TGGTGAGTTA TCTGGTGGCG AGCGTCAACG GGTTGCGGTT
GCTAGAGCGC TCGTAGGTAA TCCTGCTTGT GTGCTGGCTG ATGAGCCTAC CGGGAACTTA
GATACCGAAA CTGCCGATGG GGTCTTTGAT TTGATGTTGG ATATTGCGCG TGAACAAGGT
ACTGCTTTTG TCATCGTGAC CCATGACCCA GTCCGCGCTA AACGTTGTGA CCGTATTTTG
CATTTAGAGC GTGGAGTATT AAAGACCTTT TCTCAATAG
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| Protein sequence | MSKDMNSFVL VAKGLVKTYG QGPTAVDVLK SVDLEVSLSE KVAIVGSSGS GKSTLLHLLG
GLDTPSAGSV MLAGSNLSTL SVAKLDRLRN HSLGFIYQFH HLLDEFSAAE NVALPLRIRG
LSNEESMDRA SKILKAVGLA SRELHTPGEL SGGERQRVAV ARALVGNPAC VLADEPTGNL
DTETADGVFD LMLDIAREQG TAFVIVTHDP VRAKRCDRIL HLERGVLKTF SQ
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