Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1461 |
Symbol | |
ID | 5053778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 1536388 |
End bp | 1537752 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640471633 |
Product | DNA repair protein RadA |
Protein accession | YP_001156239 |
Protein GI | 145589642 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.421655 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCTAAAG TCAAAACGAT TTATATCTGC CAGTCCTGTG GTGGCACCTC TGCTAAATGG CAAGGTCAGT GTCCCTCATG CCAAGCTTGG AACACTCTAG AAGAGGGTTT GCCAGAGACC ACTTCGAATG CGCGTTTTCA GTGTTTGGCA CAATCACTGC CAAGGCAAAA ATTGTCGGCC ATTACTGCGG AAGATTTGCC GAGATTTAGT ACTGGAGTAG AAGAGTTTGA CCGCGTCTTA GGTGGCGGAT TGGTGCCCGG TGGAGTAGTT CTTTTGGGTG GTGATCCCGG CATTGGTAAA TCTACTTTAC TGTTGCAGGC TTTAGCTGAG ATGAGTTCTG CTGGTATGAA TGTTCTCTAC AGCAGCGGTG AAGAATCTGC GGCTCAAATT GCACTTCGTG CAAAACGGAT TGCCTTGGAT GCACCTCAAT TAGAAGTGTT GGCGGAAATT CAGTTAGAAA AACTCATTTC GATTATGGAT ACCGTCAAGC CACAAGTGTT AGTGGTCGAC TCTATTCAAA CCTTGTATTC AGAAGTATTA AGTTCTGCAC CGGGATCCGT TGCTCAGGTC AGAGAGTGCG CAGCGCAATT AACTCGAGCA GCTAAATCGA GTGGAATTTG TGTATTGATG GTTGGACATG TCACTAAAGA TGGACATTTG GCGGGCCCTC GTGTCTTAGA GCACATTGTT GATACCGTCC TTTATTTTGA GGGCGATACT CACTCTTCTT TCCGCCTAGT TCGCTCTATC AAGAATCGTT TTGGCGCAGT AAATGAGTTG GGCGTTTTCG CGATGACCGA AAAAGGTTTG CGCGGAGTCA CCAATCCTTC GGCTATATTC CTGTCACAGC ACGAACAGAT GGTGCCGGGC GCTTGTGTGT TGGTTACGCA AGAGGGTAGT AGACCGCTTT TAGTCGAAAT TCAGGCTTTA GTAGATACAG CACACGTTCC AAACCCGCGG CGTTTAGCGG TTGGTCTAGA GCAAGCGCGT TTGGCAATGT TGTTAGCAGT TTTACATCGC CATGCTGGCA TCGCCTGTTT TGATCAAGAT GTTTTCTTAA ATGCGGTAGG TGGAGTCAAA ATTTCTGAGC CCGCCGCTGA CTTAGCGGTG CTGCTTGCTA TTCAGTCATC TATTCGTAAT CGTGCTTTAC CTAAAGAGTT GATTGTTTTT GGTGAGGTAG GTTTGGCTGG AGAGATCCGT CCTTGCCCGC GCGGGCAAGA GCGCTTAAAA GAGGCTGCTA AGTTGGGTTT TACCGTTGCC ATTATTCCAA AAGCAAACAT GCCCAAGACC AAAATACCTG GATTGAAAGT GATTCCGGTA GAGCGAATTG ATCAGGCTAT CGCAGCAGCT GCCGAACTTA ATTAA
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Protein sequence | MAKVKTIYIC QSCGGTSAKW QGQCPSCQAW NTLEEGLPET TSNARFQCLA QSLPRQKLSA ITAEDLPRFS TGVEEFDRVL GGGLVPGGVV LLGGDPGIGK STLLLQALAE MSSAGMNVLY SSGEESAAQI ALRAKRIALD APQLEVLAEI QLEKLISIMD TVKPQVLVVD SIQTLYSEVL SSAPGSVAQV RECAAQLTRA AKSSGICVLM VGHVTKDGHL AGPRVLEHIV DTVLYFEGDT HSSFRLVRSI KNRFGAVNEL GVFAMTEKGL RGVTNPSAIF LSQHEQMVPG ACVLVTQEGS RPLLVEIQAL VDTAHVPNPR RLAVGLEQAR LAMLLAVLHR HAGIACFDQD VFLNAVGGVK ISEPAADLAV LLAIQSSIRN RALPKELIVF GEVGLAGEIR PCPRGQERLK EAAKLGFTVA IIPKANMPKT KIPGLKVIPV ERIDQAIAAA AELN
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