Gene Pnuc_1454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1454 
Symbol 
ID5052531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1526200 
End bp1526610 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content42% 
IMG OID640471626 
ProductDoxX family protein 
Protein accessionYP_001156232 
Protein GI145589635 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAGT TTCAAAGCAC AATCAATTTA GTTGGCCGCA TCGCTATTGC GACCTTATTT 
TTACCTGCTG GCATTCAAAA ATTGATTGGG ATCGAAGGTA CTATTGCCTA TTTTGGATCT 
TTGGGGCTTC CAGCTCTCGC CATTTTGGTT TGGGTAGTTA TTGCTATCGA AATTTTAGGA 
GGCCTTGCTT TAATTCTTGG CTATCACACA CGTGTTGTTG CCCTTGGGTT GGCAATCTTT 
ACATTGGGTG CAAGTATTGT TGGCCATCCA TTTTGGGCAG CGCCACAAGA TGCAGCGTTT 
ATTGCACAAC TTTTATTCAT TAAAAATATG GCCATTTTGG GCGGCTTATT GGTCTTGTCT 
TCATCTGGTG CAGGTTCCTT TAGCTTAGAT GCCCGCAAAA GTAAGGCATA A
 
Protein sequence
MNKFQSTINL VGRIAIATLF LPAGIQKLIG IEGTIAYFGS LGLPALAILV WVVIAIEILG 
GLALILGYHT RVVALGLAIF TLGASIVGHP FWAAPQDAAF IAQLLFIKNM AILGGLLVLS 
SSGAGSFSLD ARKSKA