| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1451 |
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| Symbol | rpsB |
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| ID | 5052528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1521667 |
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| End bp | 1522416 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640471623 |
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| Product | 30S ribosomal protein S2 |
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| Protein accession | YP_001156229 |
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| Protein GI | 145589632 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0052] Ribosomal protein S2 |
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| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAGTAA CAATGCGTCA GATGCTGGAA GCCGGTTGCC ATTTTGGTCA CCAAACACGC
TTCTGGTCCC CAAAGATGGC CCCTTTTATT TTCGGTCATC GCAATAAGAT CCACATTATC
AACTTGGAAA AAACATTGCC AATGTTTCAG GATGCCCTGA AATTTGCAAA ACAAGTTGCT
TCTAATCGTG GCACGATTTT GTTTGTTGGT ACTAAGCGTC AATCACGCGA GATCATTGCT
GAAGAAGCTG CTCGTGCCGG TATGCCTTAT ATCGATAGCC GTTGGTTGGG CGGTACGCTC
ACTAACTTTA AAACTGTTAA AGGTTCACTC AAGCGTTTGA AAGATATGGC AGTTGCTAAA
GAAGCAGGTG ATTGGGAGAA GCTTTCCAAA AAAGAAGCTT TGACCAATGA CCGCGATCTC
GATAAGTTAC AAAAAGCACT TGGCGGAATT CAGGATTTGA ATGGCGTTCC TGATGCAATT
TTCGTTGTGG ACGTTGGCTA TCACAAGATT GCTATTACTG AAGCTAACAA GTTAGGTATT
CCAGTAATCG CTGTTGTGGA TACCAACCAC TCACCAGAAG GTGTTGATTA CATTATCCCT
GGTAACGATG ACTCTAGCAA AGCTGTTCTT CTCTATGCGC GTGGCATTGC TGATGCAATC
CTCGAAGGCA AAGCAAATTC TGTTCAAGAA ATTTTGACAG CCGTTAAAGA GGGTGAAGAA
GAGTTTGTTG AAGAAGGGAA AGCTGAATAA
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| Protein sequence | MSVTMRQMLE AGCHFGHQTR FWSPKMAPFI FGHRNKIHII NLEKTLPMFQ DALKFAKQVA
SNRGTILFVG TKRQSREIIA EEAARAGMPY IDSRWLGGTL TNFKTVKGSL KRLKDMAVAK
EAGDWEKLSK KEALTNDRDL DKLQKALGGI QDLNGVPDAI FVVDVGYHKI AITEANKLGI
PVIAVVDTNH SPEGVDYIIP GNDDSSKAVL LYARGIADAI LEGKANSVQE ILTAVKEGEE
EFVEEGKAE
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