Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1441 |
Symbol | lpxD |
ID | 5052679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 1511346 |
End bp | 1512413 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640471613 |
Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
Protein accession | YP_001156219 |
Protein GI | 145589622 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.11443 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTACCG CCATTGAGCT GGCCAATCAG TTTCAAGCAA GCTTGGTGGG GGAAGCCTCC ACAGTTTTTA ATGGTTTAGC ACCCCTTGAG CGGGCGCAAT CAAGCCAAAT CTCCTTTTTA TCGAATCCTC TCTACCGTAA GCAAGCCGCC GACAGTAGCG CTGGCGCTTT AATTGTTAGC AAAGCAGATT TAGAATTTTT ACAAGCCAAT CCAGGAACTC ATTCCTCTGG ACGAGTCTAT TTTGTTGCTA AAAATCCCTA TGCTACTTTT GCAAGAGTTG CGCAATATTT TGCTCGGCAA AGCGCCCCCA TATATGAACC GGGTATTCAC TCTGCTGCAG TGGTTGACCC AAGCGCTAGC ATTCCAGCCT CCTGTCATAT TGGTCCGTTT GTACGTATAG GTGCTGGCGT TAAGCTTGGA GAGCGCGTTG CAATTTTAGG CAATACTTTT GTTGCAGAAA ATTGTGACAT CGCTAGCGAC ACTTTAATTT ATCCGGCGGT ATCACTTTAT TTTGGCACGC AAATTGGTGA GCGTTGCATT ATTCATAGTG GAGCCGTCAT TGGTGCTGAT GGCTTTGGGT TCGCCCCTGA TTTTTCTGCG ACTGGTGGAG AGTGGGTAAA AATTCCTCAG ACTGGTAATG TAGTTATCGG AAGCGATGTA GAGATTGGAG CATCAACGAC AATTGATCGT GGGGCTATGA GTGACACCAT CATCGGCTCA GGTAGCAAAA TTGACAATCA AGTGCAGATC GCACATAACG TAGTAGTGGG CAATTGCTGC GTGATTGCGG GCTGCGCTGC AATTTCAGGG AGCACCAAAA TTGGCAATTT CTGCATCATT GGTGGCGCCG CTAATTTTGC TGGCCATCTA ACGATTGCTG ATAGAACAAC GGTTTCTGGC AATACTTCTA TTATTCGCTC GATTACAGAG CCTGGTCAGC ATTACACCGG CGTCTACCCA TCAATGCTTC ATGGGGCCTG GGAAAAAAAT GCGGCGATCT TGCGTGGACT CGATAAAATA CGCCAACGCC TGCGTTTATT GGATAAAAAC AAAAGTACGG AGTCTTAA
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Protein sequence | MLTAIELANQ FQASLVGEAS TVFNGLAPLE RAQSSQISFL SNPLYRKQAA DSSAGALIVS KADLEFLQAN PGTHSSGRVY FVAKNPYATF ARVAQYFARQ SAPIYEPGIH SAAVVDPSAS IPASCHIGPF VRIGAGVKLG ERVAILGNTF VAENCDIASD TLIYPAVSLY FGTQIGERCI IHSGAVIGAD GFGFAPDFSA TGGEWVKIPQ TGNVVIGSDV EIGASTTIDR GAMSDTIIGS GSKIDNQVQI AHNVVVGNCC VIAGCAAISG STKIGNFCII GGAANFAGHL TIADRTTVSG NTSIIRSITE PGQHYTGVYP SMLHGAWEKN AAILRGLDKI RQRLRLLDKN KSTES
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