| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1438 |
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| Symbol | |
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| ID | 5053655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1508834 |
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| End bp | 1510039 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640471610 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_001156216 |
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| Protein GI | 145589619 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.14396 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCAAAGT TAGCTTGTGT AGCTGGCGAG CCTTCTGGTG ATTTATTAGC CGCGCCAGTT
CTGAGCGCCT TAAATCAAAT TCCAGATATG GCGGGCCTAG AGGTCTACGG CATTGGAGGC
CCAAGGATGC AAGCCCAGGG CATGCACTCC GATTGGCCTA TGGAAACACT GAGTGTTCGT
GGGTATGTAG AGGCCATTAA GCAGCTTCCC GCCATCTTGA AACTTCGTAA AGAGCTGATT
GCCAATCTTC TAGGTGAGGG TCGTCCTGAT GTCTATTTAG GTATTGATGC CCCCGACTTT
AATTTAGGGG TAGAGCTGCA ATTACGAAAG GCCGGAATCC CTACCTTGCA TTTGGTGTCT
CCATCTATTT GGGCATGGAG AGCGGGGCGT ATCAAAAAGA TTTCTCAAGC AGTGGAGAGA
ATGCTGTGTA TTTTTCCATT TGAAACCGAG ATTTATGATC GTGCTGGAGT AGCCTCTACT
TATGTGGGCC ATCCTTTGGC AAGTGATATT CCACTTGAAC CCAACACACC AGCAGCAAGA
ATAAAACTGA CGCACACTTT AAATCTTTCT GAGGGCGCAT TAGAGGGAAT TGCAGTTGCA
GTTTTACCGG GTAGTCGTGG ATCTGAAATT GAACACATTG CGCCGATATT TTTCCAGACA
ATGGAATTAT TAGCGGATCG CCTTCAAGGA CAAACGTTGA ATTTCTTAAT CCCTATTGCG
ACACCTCGCT TGCGTGAGCC GCTTGAGCAG TTGTTAGAGA AAACTAGAAA GCAGTATCCC
GATATTCGAA TTCATTTGAT TGATGGCATG GCAGATGAAG TATTGGAAGC TTCTGATGTT
GTGTTGATTG CCAGTGGAAC CGCGACATTA CAGGCGGCAT TGTGGAAAAA ACCCATGGTG
ATTTCTTATA AAGTGCCTTG GTTAACGGCG CAAATTATGA AGCGACAGGG TTATATGCCT
TATGTCGGCC TACCTAATAT TTTGTGTGGA GAATTTGTGG TGCCTGAATT GCTACAAGAT
GATGCTACTC CCGAGAAATT GGCAGCCGCT GTCCTCAATT GGTTAGACCA TCCTAGTAAG
GTTGCTGAGT TGAAGGCACG TTTTGCAAAA ATGCATGAAA CCTTACGCCG ACCAACGGGA
TTATTGGTTG CACAAGCTGT TGCCCAAACG ATTGCTAATG GCCGCAAGAA TAGAGTGAGT
GCATGA
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| Protein sequence | MPKLACVAGE PSGDLLAAPV LSALNQIPDM AGLEVYGIGG PRMQAQGMHS DWPMETLSVR
GYVEAIKQLP AILKLRKELI ANLLGEGRPD VYLGIDAPDF NLGVELQLRK AGIPTLHLVS
PSIWAWRAGR IKKISQAVER MLCIFPFETE IYDRAGVAST YVGHPLASDI PLEPNTPAAR
IKLTHTLNLS EGALEGIAVA VLPGSRGSEI EHIAPIFFQT MELLADRLQG QTLNFLIPIA
TPRLREPLEQ LLEKTRKQYP DIRIHLIDGM ADEVLEASDV VLIASGTATL QAALWKKPMV
ISYKVPWLTA QIMKRQGYMP YVGLPNILCG EFVVPELLQD DATPEKLAAA VLNWLDHPSK
VAELKARFAK MHETLRRPTG LLVAQAVAQT IANGRKNRVS A
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