Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1434 |
Symbol | |
ID | 5052518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 1505231 |
End bp | 1506058 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640471606 |
Product | hypothetical protein |
Protein accession | YP_001156212 |
Protein GI | 145589615 |
COG category | [S] Function unknown |
COG ID | [COG1806] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.855311 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTACTG AAACCCGCAT TGTTTTTATC GTCTCTGATG GCACCGGCAT CACGGCCGAG AACTTCAGTC AGTCGATTTT GGCTCAATTT GAGGCCACTT TTAAGCACAT TCGTGTACCT TTTGTGGATA GCGTTGATAA GGCGCATGAC GCAGTCAAAA GCATCAACCA AGCGGCCGGT AACTATGGGG GGCAACCTAT TGTTTTCACA ACTTTGGTGA ATTCTGAGCT CAATGCCATA GTCGCTAAGG CCAACGGGCT CATTTTGGAT ATGTTCCAGA CCTTTGTAGC GCCTTTAGAG GCCGCCCTGG GTATGAAATC CACCCATGCC ATGAACCGCC TTCACCATAA TGCCGACACT GAGGCCTATA AAAACCGTAT CGAGGCTATT AACTATTCAC TAGCCCATGA TGACGGTCAA TCCAATCAAA ACCTGGCTGA GGCAGATGTC ATTTTGGTTG GTATTTCACG GGTTGGCAAA ACCCCAACTA GCCTTTATTT GGCAATGCAA TATGGATTAA AAGCCGCCAA TTACCCCCTC ATTCCCGAGG ACTTTGAACG CGGGCAGCTA CCAAAAGATT TAATCCCTTA TCGCCAGAAA ATCTTTGGCC TGATGATTGA TGCAGAACGT CTCTCGGAGA TTCGCAATGA GCGCAGACCG GGCAGTAATT ACGCTAAATT AGAAAACTGT CGCTATGAAA TTAATGAAGC CACTGCGATG ATGAAAAAGC AATCTATTCC ATGGGTGCTC ACTACTAGCA AATCCATTGA AGAAATTGCC ACCACCGTGC TTCAAGCGAT CAAGTCAGAC AGAACCATCC TAGGATAG
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Protein sequence | MSTETRIVFI VSDGTGITAE NFSQSILAQF EATFKHIRVP FVDSVDKAHD AVKSINQAAG NYGGQPIVFT TLVNSELNAI VAKANGLILD MFQTFVAPLE AALGMKSTHA MNRLHHNADT EAYKNRIEAI NYSLAHDDGQ SNQNLAEADV ILVGISRVGK TPTSLYLAMQ YGLKAANYPL IPEDFERGQL PKDLIPYRQK IFGLMIDAER LSEIRNERRP GSNYAKLENC RYEINEATAM MKKQSIPWVL TTSKSIEEIA TTVLQAIKSD RTILG
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