Gene Pnuc_1427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1427 
Symbol 
ID5053513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1497022 
End bp1498434 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content46% 
IMG OID640471599 
Producthypothetical protein 
Protein accessionYP_001156205 
Protein GI145589608 
COG category[S] Function unknown 
COG ID[COG2308] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTGC CTTATGACGA AATGCTCGAC GCAGCAGGTA AATCGCGTCC ACACTACCAA 
ATTTTTCACA ACTGGCTGAA AGAGCAAAGT GACACCCTCA TGGGTCTCAA ACGCGCTGAG 
GCCGACCTGA TCTTTAGGCG TGTTGGTATC ACTTTTGCGG TTTATGGCGA CGACCTGGGT 
TCAGAAAGAA CTATTCCATT TGATCAAGTA CCCCGCATCT TCACTGCCAA AGAGTGGGAA 
CAACTTGAGG CGGGATTACG TCAGCGCGTC AAAGCGCTCA ATCGCTTTAT CTATGACGTG 
TATCACGAAG AAGAAATTAT TAAAGCAGGT ATCGTTCCTG CTGAACAAAT TTATAACAAT 
GCGCAATATC GTCCAGAGAT GCGCAATGTG AGCGTGCCAC GCGACATCTA TGCACAAATT 
GCAGGTATTG ATATTGTGCG CGCGGGTGAA GGTGAGTTCT ACGTTTTAGA AGATAACTTA 
CGTGTACCTT CTGGTGTTTC ATACATGGTT GAAGATCGCA AAATGATGAT GCGTCTTTTC 
CCGGACCTCT TCCAAAAATA TCGCATTGCT CCAGTGGAAC ACTATCCAGA CTTATTATTG 
GAGTGTCTGA AGTCGGTTAA ACCAGATGAT GTTAAAAAAC CGAACGTTGT TGTGCTTACG 
CCGGGTATGT ATAACTCGGC TTACTTCGAA CACAGCTACC TTGCTCAGCA AATGGGCGTT 
GAATTGGTAG AAGGTAAAGA TCTCTTTGTT AAAAACGAAC AAGTCTTTAT GCGCACTACG 
CAAGGCCCAG AGCGCGTTGA TGTTATTTAT CGCCGGGTAG ATGATGACTT TTTGGATCCC 
CTAGCATTCC GCTCAGATTC AACCTTAGGT GTTGCAGGCC TACTCTCGGC TCATCGCGCT 
GGTAACGTGA CTTTGGCTAA TGCTATCGGC ACCGGTATCG CCGACGATAA ATCGATTTAT 
CCATACGTTC CCGAGATGAT TGAGTTTTAC CTTGGTGAGA AACCCATTCT CAATAACGTC 
CCCACGTTCC AATGCCGTAA GCCAGATGAT TTGGCGTATA CATTAGCCAA TCTCGATAAG 
CTCGTTGTCA AACTAACCCA TGGCGCAGGT GGTTATGGCA TGTTGGTCGG CCCAGCCTCA 
ACCAAAGCCG AGATAGAAGA ATTTAGAGTG CACTTGCTTG CCAATCCAGA CAAGTACATT 
GCGCAGCCAA CCTTAGCGCT CTCTACCTGC CCAACATTTG TGGAGTCTGG AGTAGCACCA 
AGGCATATTG ATTTGCGGCC TTTTGTTCTC TCTGGAAAGA CCATCAAAAT GGTTCCCGGC 
GGATTGACTA GGGTTGCCCT CAAAGAAGGT TCTTTAGTAG TGAACTCCTC TCAAGGTGGT 
GGTACTAAAG ATACCTGGGT ATTAGAGGAA TAA
 
Protein sequence
MKLPYDEMLD AAGKSRPHYQ IFHNWLKEQS DTLMGLKRAE ADLIFRRVGI TFAVYGDDLG 
SERTIPFDQV PRIFTAKEWE QLEAGLRQRV KALNRFIYDV YHEEEIIKAG IVPAEQIYNN 
AQYRPEMRNV SVPRDIYAQI AGIDIVRAGE GEFYVLEDNL RVPSGVSYMV EDRKMMMRLF 
PDLFQKYRIA PVEHYPDLLL ECLKSVKPDD VKKPNVVVLT PGMYNSAYFE HSYLAQQMGV 
ELVEGKDLFV KNEQVFMRTT QGPERVDVIY RRVDDDFLDP LAFRSDSTLG VAGLLSAHRA 
GNVTLANAIG TGIADDKSIY PYVPEMIEFY LGEKPILNNV PTFQCRKPDD LAYTLANLDK 
LVVKLTHGAG GYGMLVGPAS TKAEIEEFRV HLLANPDKYI AQPTLALSTC PTFVESGVAP 
RHIDLRPFVL SGKTIKMVPG GLTRVALKEG SLVVNSSQGG GTKDTWVLEE