Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1420 |
Symbol | |
ID | 5052411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 1489767 |
End bp | 1491665 |
Gene Length | 1899 bp |
Protein Length | 632 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640471592 |
Product | radical SAM domain-containing protein |
Protein accession | YP_001156198 |
Protein GI | 145589601 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGTCC TAAGCCTCAT CCCGCCAATG ACACAGCTGA ATACGCCGTA TCCATCTACG GCTTATCTCA CTGGATTTTT GAGATCACGC GGCGTTGATG CTGTGCAAGA AGATTTGGCT CTGGCATTGG TATTGAGCTT TTTTACTCCC GAGGGTTTGG CTCAGGTGCG CGCAAAAGCG AAAAGTCTGC CTGAGGAAGT GCGTACCGCT AGTGTCAATT TCTTTCTAGA TTATTTTGCT GAATATCAGT CAACCATTGC TTCGGTAATT GCATTCTTGC AGGGACGAGA TAGCACCTTA AGTCACCGCA TCAATAGCCG GGAATTTTTA CCAGAAGGGC CGCGCTTTCA ATCTCTTGAA GCCTATGACG ATGAAGAGAC GGGAGATCCA CTGGCTTGGG CGTTTGGTGC TTTAGGCTCA CACGATAGGG CACGTCATTT GGCGACCTTA TATCTAAATG ATCTCTCTGA TGTTTTGCGA GATGCAGTAG ATGATCGCTT TGAGTTTGTA CGCTATGCGG AATCTCTTGC AAGTAATCAG CCTACTTTCA CGCCCTTGGC AAATGCATTA AAGGAAAAAC CGAGTCTATT AGATTTGTGC TTACAGGAAT TAAGTCTGGC GTCAATCAGA AAGCACAACC CCGACTTGGT ATTGTTATCA GTACCGTTTC CTGGTGCGAT GTATGCGGCC TTACGCATAG CGCAATGCAT TAAAAAATCA GACCCTAAAA TCAACATTGT CTTGGGTGGT GGGTATGTGA ATACCGAGCT GCGTGAGTTA AAGGATGCCC GGATTTTTGA TTACGTAGAC TTCATCACCT TAGATTCTGG CGAAAGACCT TTGCTTGCCT TACTGGAACA TCTTGAAGGT AAGCGCTCAG CTGATCGCTT GGTCCGCACC TTTATTCGCG ATGAAGATCG TAACGTGCGT TACATCGCCT GGCCAGAGCC AGATGTGCCG TTTGAGGAAG TTGGGACTGC AACTTGGGAT GGTTTGCCAC TCAACTCCTA TCTATCCTTA CTAGATATGC TTAACCCAAT GCATCGCCTG TGGAGTGATG GCCGTTGGAA TAAATTAACA GTTGCACACG GTTGTTATTG GAAAAAGTGT AGCTTTTGCG ATGTGTCGCT TGATTACATT TCTCGCTATG AAACTGCTTC GGCCTCTTTG TTGGTGGATC GCATCGAGCA CATCATTACA GAAACAGGTC AAACTGGATT CCATTTTGTA GATGAGGCAG CACCGCCAAA AATCCTTAAA GCACTGGCTG AAGAACTCAT TCGTCGTAAG GTAGTTATTT CTTGGTGGGG CAATATCCGC TTTGAAAAAA CATTTACACC AAAGCTGGCT CAATTATTAG CAAGGAGTGG ATGTATAGCA ATGTCTGGGG GACTAGAGGT TGCTTCCGAT AGATTGCTGG CGTTAATGAA GAAGGGCGTT TCAGTGGATC AGGTAGCCCA AGTCACCAAA GGCTTTTCTG ACGCCGGTAT ATTGGTGCAT GCTTATTTAA TGTATGGATT TCCAACGCAA ACTGTGCAAG AAACCGTGGA CTCATTAGAG TATGTGAAGC AGTTATTTGA GAATGGCTGC ATTCAAAGCG GGTTCTTTCA TCGCTTTACT TGTACCGTTC ACTCTCCTGT GGGTCAAAAT CCAGAGGAAT ACGGAATTGA GCTGCAACCT TTGCCTGAGA TTACATTTGC TAAGAATGAT GTAGGCTTTA TCGATCCTAC TGGCGTTGAT CACGACATAT TAGGCTTAGG TCTAAAAAAA GCGATTTATA ACTATATGCA TGGTCTTGGT TTTGAGGTGA AGGCAGACGT TTGGTTCGCA GATTTAGGTA TGCGCATTCC AAGAACTTCC ATTGCTTCAG ATCATATAGC TAGAGCCCTC TATAGCTAG
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Protein sequence | MKVLSLIPPM TQLNTPYPST AYLTGFLRSR GVDAVQEDLA LALVLSFFTP EGLAQVRAKA KSLPEEVRTA SVNFFLDYFA EYQSTIASVI AFLQGRDSTL SHRINSREFL PEGPRFQSLE AYDDEETGDP LAWAFGALGS HDRARHLATL YLNDLSDVLR DAVDDRFEFV RYAESLASNQ PTFTPLANAL KEKPSLLDLC LQELSLASIR KHNPDLVLLS VPFPGAMYAA LRIAQCIKKS DPKINIVLGG GYVNTELREL KDARIFDYVD FITLDSGERP LLALLEHLEG KRSADRLVRT FIRDEDRNVR YIAWPEPDVP FEEVGTATWD GLPLNSYLSL LDMLNPMHRL WSDGRWNKLT VAHGCYWKKC SFCDVSLDYI SRYETASASL LVDRIEHIIT ETGQTGFHFV DEAAPPKILK ALAEELIRRK VVISWWGNIR FEKTFTPKLA QLLARSGCIA MSGGLEVASD RLLALMKKGV SVDQVAQVTK GFSDAGILVH AYLMYGFPTQ TVQETVDSLE YVKQLFENGC IQSGFFHRFT CTVHSPVGQN PEEYGIELQP LPEITFAKND VGFIDPTGVD HDILGLGLKK AIYNYMHGLG FEVKADVWFA DLGMRIPRTS IASDHIARAL YS
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