| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1415 |
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| Symbol | |
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| ID | 5052985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1486419 |
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| End bp | 1487363 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640471587 |
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| Product | muramoyltetrapeptide carboxypeptidase |
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| Protein accession | YP_001156193 |
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| Protein GI | 145589596 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAATCGA TTCACCTTGT GGCCCCTTCG GGAGCAAGCT TGGATGAAAA AAGTCCCTTA
GCAGGGATTG CTTGGCTTGA GGGCCAGGGA TTTTCTATTC ATAATCCCCA GTGTGTTCAT
CGTGTGCATG AGCGTTTCGC TGGAAGTGAT GAAGAGCGTT TGCGCGAGCT GAACGAGATA
TCTTCTTTAG ACCCTCAATC TGTCGTAATG GCGATGCGTG GTGGATATGG AATTCATCGG
CTCCTCCAGA ACATTGATTG GTCATCCATC AGTAAGGCTG TAGATCACGG TTTACAGATC
TGCGGTCACA GTGACTTCAC TGCATTTGAG TTGGGATTGC TAGCCAAAAC TGGTGCAATG
AGCTTATCTG GTCCTATGCT CAATTTCGAT TTCGGAAGAA TGGATGAGGG CGGCGTTGCT
GTTACTCCGG ATACCTTTAT GTGGAAGCAT TTCTTGTACG CTATTCAAGA GCACAAGTTA
GACTGCACAA TATCTGCAGC GCAATCCTTT TTGGGTGAAA ACACTTCCCA GTCCATTACC
GGCATACTTT GGGGTGGCAA TTTAACTGTC TTGGCCTCAT TAATAGGAAC GTCTTACTTA
CCATCATCAA AGCAAACACA GGGTGGAATA TTATTCTTGG AGGATGTCAA TGAACATCCT
TATCGCCTGG AAAGAACCTT GATGCAGTTG CTTGATGCCG GTGTACTAGC TGGACAAGCC
GCGGTTCTAT TGGGTGGTTT CTCGGCTTAT CGTCTATACG ATAACGATAA AGGCTATACC
TTAGAGCGCG CAGTGGAAGC CATTCGTCAG CGCTTGCCAC AATCCATTCC GATCATCACG
GATTTACCCT TTGGTCATCA ATCTAATAAG CTAACATTAC CGGTTGGTGC TGAGGCGACC
TTAGATTACA ACTCCACCAG CTTTACCTTA AAATCCAACT GGTAG
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| Protein sequence | MKSIHLVAPS GASLDEKSPL AGIAWLEGQG FSIHNPQCVH RVHERFAGSD EERLRELNEI
SSLDPQSVVM AMRGGYGIHR LLQNIDWSSI SKAVDHGLQI CGHSDFTAFE LGLLAKTGAM
SLSGPMLNFD FGRMDEGGVA VTPDTFMWKH FLYAIQEHKL DCTISAAQSF LGENTSQSIT
GILWGGNLTV LASLIGTSYL PSSKQTQGGI LFLEDVNEHP YRLERTLMQL LDAGVLAGQA
AVLLGGFSAY RLYDNDKGYT LERAVEAIRQ RLPQSIPIIT DLPFGHQSNK LTLPVGAEAT
LDYNSTSFTL KSNW
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