Gene Pnuc_1414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1414 
Symbol 
ID5053020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1485787 
End bp1486350 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content43% 
IMG OID640471586 
ProductSOUL heme-binding protein 
Protein accessionYP_001156192 
Protein GI145589595 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATCG AAGAGCCAAA ATATACTGTT CTAGAAAAAA CAATCCCATT TGAATTGAGA 
TCATATGCGC CAATGATTTT GGCTGAGGTT CAGGTGGATG GTGATTTGGA TGAGGCCTCG 
AGCCAAGGAT TTCGATTAAT AGCGGCTTAT ATCTTTGGCC AGAATCGGGT CAGTGAAAAA 
ATTGCGATGA CCGCTCCTGT TGCCATTGAA GAACAATCCG TAAGTTCAAA AATTGCAATG 
ACAGCCCCAG TCAATATTGA GGGTAATAGC GGTCAATGGA CAGTTTCTTT TGTGATGCCT 
AGCGAATACA CCATGGAAAG CATTCCTAAG CCACTCAATT CAAAAGTAGT CTTGAGGCAG 
ATACCGACTG TTAAAAGGGC GGTAGTCCAA TTTTCTGGGT TTTATAACAA CGCAAAAATA 
GCAGAGAGAA CCGTGGAGCT TGAAGAGTGG ATGAAGACTA AAGATCTTCA AGCTATAGGG 
GTACCTAAGT TTGCACGCTA TAACCCGCCT TGGACGCTTC CTTTTTTACG TCGCAACGAG 
ATCATGATCG ATGTTCGTGA CTAA
 
Protein sequence
MAIEEPKYTV LEKTIPFELR SYAPMILAEV QVDGDLDEAS SQGFRLIAAY IFGQNRVSEK 
IAMTAPVAIE EQSVSSKIAM TAPVNIEGNS GQWTVSFVMP SEYTMESIPK PLNSKVVLRQ 
IPTVKRAVVQ FSGFYNNAKI AERTVELEEW MKTKDLQAIG VPKFARYNPP WTLPFLRRNE 
IMIDVRD