| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1411 |
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| Symbol | |
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| ID | 5053601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1482847 |
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| End bp | 1484106 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640471583 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001156189 |
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| Protein GI | 145589592 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTATTA GCGTCAACAC TATGCGTGCT ATCGATCATT GGGTTGGTGT GCCACTTTGC
GCCATCGCCA GCCCAGTAGT CGCGTTGATT GATAGCATTA AAAATATCTT CAATCGCGGG
CCACAAACAC CTAAGAGATT ACTTTTTATT GAACTCTCTG AAATGGGTAG CGCCATTTTG
GTTGACCCAG CTATGCGCAA CGCACAAGCA CGTGGCGCTG AATTATTTTT TCTGATCTTT
AAAAGTAATC GCGCTAGTTT GACCCTGTTA AATACTGTCA AGCCTGAGAA TATTTTTACG
ATTGATTCTT CAAGCTTGGG TAGCCTTATT AAGGATACCG TCCGTTTTCT TTGGATCGCC
CGTTGGAAGC GTATTGATAC CGTAATTGAT TTGGAATTGT TTTCACGCTT TACCGCCCTT
CTCACTGGCC TATGCGGAGC AAGACGTCGC GTGGGCTATC ACATCTTTCA TGGTGAGGGA
TTGTGGCGGG GTTTTATGCT CACCCGCAAG GTGCATTACA ACCCCCATAT TCATATCACC
AAAAACTTTC TCTCTTTAAT ACATGCCGCT TTTGCTCGAG AGATTGAAGT TCCATTTAGC
AAAATTCATA TTGCAGATTC AGAAGTGCGA TTAGAGCAAG CAGTGATTCA TCCCGAAGTA
TTAGAAAAGG TGCGGGTACG TATTGAGAAA AAGGCGAAAG AAGCCAATAT TCCTTACGAG
CATGGAAAAA ATCGCCTGAT TTTGATTAAC CCGAATGCAA GCGATCTCTT GCCGCAACGT
CGCTGGGCAC AACAGCGATT CTCTGAGCTC ATCCAAGCAG TCCATCAGCG GTATCCAGAA
GATTTAATAT TGATCACCGG CTCTCCTGCT GAGTTTGTCT ATGTAGACAA AGTAAGAGCA
GTAGCAAATG TCAAAAATGC CTTAAATTTT GCTGGGCAAG TCAGCTTTGC AGAATTACCT
CCGTTGTATA CCCTCTCTGA TGTGATGGTG ACGAATGATT CAGGCCCCGG ACATTTCTCA
GCTGTTACTC CACTACGTAC CGTTGTACTA TTTGGACCCG AAACTCCAGC ACTCTATGGC
TCTGTTGGGA ACTCCATTGC AATTACTGCC AATCTTGCTT GCTCTCCTTG TGTTAGCGCA
GCCAATCATC GCAAAACACC GTGTCAGGAT AACGTTTGCA TGCAGGCCAT TACCGTCGAT
CAAGTTTTAG AAAAAGTCAT AGTTCAGTTA AACGATGCTG ATAAGGTAAA GGGTCGCTGA
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| Protein sequence | MTISVNTMRA IDHWVGVPLC AIASPVVALI DSIKNIFNRG PQTPKRLLFI ELSEMGSAIL
VDPAMRNAQA RGAELFFLIF KSNRASLTLL NTVKPENIFT IDSSSLGSLI KDTVRFLWIA
RWKRIDTVID LELFSRFTAL LTGLCGARRR VGYHIFHGEG LWRGFMLTRK VHYNPHIHIT
KNFLSLIHAA FAREIEVPFS KIHIADSEVR LEQAVIHPEV LEKVRVRIEK KAKEANIPYE
HGKNRLILIN PNASDLLPQR RWAQQRFSEL IQAVHQRYPE DLILITGSPA EFVYVDKVRA
VANVKNALNF AGQVSFAELP PLYTLSDVMV TNDSGPGHFS AVTPLRTVVL FGPETPALYG
SVGNSIAITA NLACSPCVSA ANHRKTPCQD NVCMQAITVD QVLEKVIVQL NDADKVKGR
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