Gene Pnuc_1408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1408 
Symbol 
ID5053580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1479379 
End bp1480191 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content45% 
IMG OID640471580 
Producthypothetical protein 
Protein accessionYP_001156186 
Protein GI145589589 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAGT CTATTTTTCT TTCTCTGCTT GTCTGCACGG CAATGATTTT GAGTGGTTGC 
GCAGGGTTTG GTGGTGGTAC CGTTCAGGAC GAGTCTGGAA AAGCATTCAA TGCCGATCAA 
ATACCCGCCC AAGATGAGCT TCCTAAATTT TCCGTAGAAA CTGCACGGGA AGGCATGCCA 
AACGGCTGGA ATTTTTACCG TATAGCACCT TATAAAAAGA ATACCGTTTA CCGCCTGGAA 
AATTACCAAG GCAGAACCGT GCTAAGTGCA AATTCTCAAA CGTCAGCATC TGGATTAGCG 
GTCAAGTTAC GTCCTCGTCA AGCAAATAAC CTGTGGTTGA AATGGGAGTG GAAGGCAACT 
GGTGCAATGC CGGCTGCCGA TAATGCAAAC GGATATCAAG ATGACGCGCC ATTGCGAATT 
TTGGTTGCGT TTGATGGTAA TAAATCAAAA TTGCCATTAA AAGAAAAGAT GAACTTTGAA 
ATGGCCAACT TAATCAGTGG TCAGGAAATG CCTTATGCCA CTCTGATGTA TATCTGGTCA 
GGTAAGGGCC AAGTTGATTC GATTATTCCG AATGTGCATA CATCACGCGT CAAAATGATT 
GTTGTGGATT CGGGTTGGGA AAATTTGGAT GAATGGCGTC ATCATCAACG CGACCTAGCT 
GCTGACTATA AGCGCGCTTA TGGCGAAGCT CCAGGTGAGG TGATTGGAAT TGCACTACTA 
ACCGATACCG ACAACACAAA ATCTGAAACT CGAGCGTTTT ACGGTGACAT TGAGCTGGTG 
CGCAAAGGCC CTGATAAGAG CGCTAGCAAA TAA
 
Protein sequence
MFKSIFLSLL VCTAMILSGC AGFGGGTVQD ESGKAFNADQ IPAQDELPKF SVETAREGMP 
NGWNFYRIAP YKKNTVYRLE NYQGRTVLSA NSQTSASGLA VKLRPRQANN LWLKWEWKAT 
GAMPAADNAN GYQDDAPLRI LVAFDGNKSK LPLKEKMNFE MANLISGQEM PYATLMYIWS 
GKGQVDSIIP NVHTSRVKMI VVDSGWENLD EWRHHQRDLA ADYKRAYGEA PGEVIGIALL 
TDTDNTKSET RAFYGDIELV RKGPDKSASK