Gene Pnuc_1395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1395 
Symbol 
ID5052988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1464621 
End bp1465682 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content45% 
IMG OID640471567 
Productformate dehydrogenase, gamma subunit 
Protein accessionYP_001156173 
Protein GI145589576 
COG category[C] Energy production and conversion 
COG ID[COG2864] Cytochrome b subunit of formate dehydrogenase 
TIGRFAM ID[TIGR01583] formate dehydrogenase, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.798928 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGAT CATTTTCTAA AGTTCTTCGC ACTTTGATAG TGGCTGCTGG TTTGTCTCTA 
GCTTTAGCGA GCGGCATGAG TCTGGCTGAA CGTGCGCCGA TGGCGCCATT GCCATCTGCT 
AGTGGGGTAG ATATTTCACC ATCATCGATT CCAGCAAATC CAAATGCCCT AGCTAACGGA 
ACTCAAGCCC AATCTCAACC AGCTAATCCC TCTATCTTTA TTGCGCCCAA TAGTGATCCG 
CAGAACTACG TCAGCATTCC AGACAAGCAA GCGGGCGTAT TAATTCAGCG TGCTGGCCAA 
CAGTGGCGCG TGATTCGGAA TGGCATCATC ACTGTTTACG GTGGCTGGCT TTTGGCAATT 
GCATTCTTCG GTATCGCCGG CGTATATACG CTTAAGGGTT CGGTCAAGCT TCATGAGCCA 
CTTTCAGGGG TCATGATTAA ACGTTTCAGT GGTTTTGATC GCCTTGTTCA CTGGGTAATG 
GCATTTAGCT TCTTGGCATT GGCCTTTACC GGTCTAATGA TTTTGTTCGG TAAGTATTTT 
GCAATGCCGT TAATGGGCGG GGTAGCGTAC GGCTCATTCT TGATGGTATG TAAAAACATC 
CATAACTTTA CTGGCCCGTT ATTTACATTA AGCATTGTGA TTTTCTTCTT GCTGTTTGTA 
GGAAAAAATA TTCCAGAAAA AGGTGACCTC CAGTGGATGC TCACATTTGG TGGCATGTTC 
AGTGGTAAGC ATGTTCCAGC TGGCTTTTTC AATATGGGTG AAAAGTTCTG GTTCTGGTTT 
GGTATGACTT TTCTTGGCTT GCTAATTTCC GCTTCTGGTT TTGTGCTCGA TATGATTGTC 
CCATTCATGC AGATTGAGTA CCTCCGCGGA ACAATGCAGA TTGCCAATAT GATTCATAGC 
AGCGCCGCTA TCTTAATGAC GGCAATGGCG ATGGGACATA TCTACATCGG TACTATCGGA 
ATGCAAGGAT CTATTGATGG CATGAAGACG GGCTACGTTG ATGCTACTTG GGCTAAAGAG 
CACCATGAAA TTTGGTACAA CAAAGTGGAT AAAAAGGGAT AA
 
Protein sequence
MKRSFSKVLR TLIVAAGLSL ALASGMSLAE RAPMAPLPSA SGVDISPSSI PANPNALANG 
TQAQSQPANP SIFIAPNSDP QNYVSIPDKQ AGVLIQRAGQ QWRVIRNGII TVYGGWLLAI 
AFFGIAGVYT LKGSVKLHEP LSGVMIKRFS GFDRLVHWVM AFSFLALAFT GLMILFGKYF 
AMPLMGGVAY GSFLMVCKNI HNFTGPLFTL SIVIFFLLFV GKNIPEKGDL QWMLTFGGMF 
SGKHVPAGFF NMGEKFWFWF GMTFLGLLIS ASGFVLDMIV PFMQIEYLRG TMQIANMIHS 
SAAILMTAMA MGHIYIGTIG MQGSIDGMKT GYVDATWAKE HHEIWYNKVD KKG