Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1386 |
Symbol | |
ID | 5053921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 1456513 |
End bp | 1457289 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640471558 |
Product | 3-hydroxybutyrate dehydrogenase |
Protein accession | YP_001156164 |
Protein GI | 145589567 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGACAT TAAAAGGTAA AACAGCATTA GTAACTGGTT CTACTAGCGG TATTGGTCTA GGTATGGCGA TTGCACTAGC TAAGCAGGGC GCCAACATCA TGGTGAATGG CTTTGGTGAA AAAGATGATG CCCTTGCGCA AATTAAAGCC TGTGGCGTTG AGGTTGACTA CCACGGCGCG GACATGAGCA AGCCAGCTGA AATTGAAGAT TTAATTAAGC AAACAGAAAA ACGTTTTGGC TCATTAGATA TATTGGTGAA TAACGCAGGT ATTCAATACA CCGCCAACAT CGAAGATTTT CCTGCGGATA AATGGGATGC CATTATTGCC ATCAATTTGA GTTCTGCGTT TCATACAACG CATCATGCTC TGCCTGGAAT GCAAAAACGC AATTGGGGCC GTATTATTAA TATTGCATCA GTGCATGGCT TAGTAGCGTC AACACAAAAG GCCGCGTATG TCGCGGCAAA ACACGGCATC GTTGGACTCA CCAAGGTAAC CGCTTTGGAA AATGCGCGTA CCGGTATTAC TTGTAATGCA ATTTGCCCAG GCTGGGTTCT CACTCCATTA GTTCAAAAAC AAGTTGATGC CCGCGCAGAG CGAGATGGCG TTTCAAATGA AGCAGCAAAA ATTGCGCTCG TTTCTGAAAA ACAACCTTCT GGACAATTTG TGACCCCTGA GCAATTGGCT GCTTTGGCTG TATTTTTATG TGGCCCAGAC GCCTCTGAAG TCCGTGGGGT AGCCTGGAAT ATGGATGGTG GCTGGACTGC CCAGTAA
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Protein sequence | MSTLKGKTAL VTGSTSGIGL GMAIALAKQG ANIMVNGFGE KDDALAQIKA CGVEVDYHGA DMSKPAEIED LIKQTEKRFG SLDILVNNAG IQYTANIEDF PADKWDAIIA INLSSAFHTT HHALPGMQKR NWGRIINIAS VHGLVASTQK AAYVAAKHGI VGLTKVTALE NARTGITCNA ICPGWVLTPL VQKQVDARAE RDGVSNEAAK IALVSEKQPS GQFVTPEQLA ALAVFLCGPD ASEVRGVAWN MDGGWTAQ
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