Gene Pnuc_1384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1384 
Symbol 
ID5052330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1455086 
End bp1455679 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content42% 
IMG OID640471556 
Producthypothetical protein 
Protein accessionYP_001156162 
Protein GI145589565 
COG category[S] Function unknown 
COG ID[COG3748] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTCAA TTTTGACTTC ATTGGGACGT ACAGTATTAG CTGGCTTTGT GCTCCTCATT 
TTGATTATCT TTGCCTTAGG CGGTAACTTT AGTTCTGCTG AATTACCATT TATTTTCCGT 
TGGTTGCACG TCATGTTTGG CGTGATGTGG ATCGGTTTGC TCTGGTACTT CAACTTTGTG 
CAAATTCCTT CCATGCCTAA GATTCCTGAT GAGCAAAAAC CAGCTATTGG TAAAGTCATT 
GCGCCTGCAG CGTTATTTTG GTTCCGTTAC GCAGCACTGT TCACTGTATT GACTGGTTTA 
ATCCTGGCAA CTTTGAATGG CTACGCACAC CAAGCCTTCA CATTACAGGC GCCATTCCGA 
GCAATTGGTT TAGGCATGTG GATTGCTCTT ATTATGGCGA TTAATGTTTG GTTCATCATT 
TGGCCTAATC AAAAACGTGC CCTTGGTATC GTTCCAGTTG AGGCTGATGT AAAGGCTAAA 
TCTGCACGTA TAGCAATGTT GACTTCACGC TTGAACACAA TGCTTTCTAT CCCAATGTTG 
TTCTTGATGG TTGCTCAATC CCATAACACG ACTTGGTTTG TGATTGTTTC TTAA
 
Protein sequence
MASILTSLGR TVLAGFVLLI LIIFALGGNF SSAELPFIFR WLHVMFGVMW IGLLWYFNFV 
QIPSMPKIPD EQKPAIGKVI APAALFWFRY AALFTVLTGL ILATLNGYAH QAFTLQAPFR 
AIGLGMWIAL IMAINVWFII WPNQKRALGI VPVEADVKAK SARIAMLTSR LNTMLSIPML 
FLMVAQSHNT TWFVIVS