Gene Pnuc_1373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1373 
Symbol 
ID5053980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1444045 
End bp1444587 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content43% 
IMG OID640471545 
Productcytochrome B561 
Protein accessionYP_001156151 
Protein GI145589554 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.219895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCGCA AGTACTATCA CCCTGCATCT ATTTTTTTTC ACTGGCTCAT TTTTACGCTT 
GTAATACTAG CTCTGGGTGT AATTGAGCTT AAAGGGCAGT TTCCTAGGGG TAGCGAGCCA 
CGAGAGCTTT GCAAAACTGT TCACAGCTTC TTAGGTCAAC TGATCTTTAT CGCAATGGCT 
ATCCGATTAT GTGTACGCCT TAAATACGGT GCGCCCAAAC CCTTGAACCT CAATAAGCCC 
TTGCTAGTCT TGGCTAAAGG TCTTCATTGG ACCTTCTATT TGCTACTACT TACTTTGCCG 
ATTATGGGAT TTATTTTCCT GCAGGCTGGT GGTAAAGAAG TCCACTTCTT AAGCTGGGCT 
TGGCCAGAGC TGATTTCACC AAACCCAGAC ATCAAAAAAA TATTTAAAGA GTCTCATGAG 
TGGCTAGGTA ATGCACTCTA CTTCTTGATT GGCTTGCATG CGCTTGCTGG CTTATGGCAC 
CACTATCTAT TAAAAGATGA CACCTTGCGT CGTATGTTGA ATAAAATAAA ACCTTCACAT 
TAA
 
Protein sequence
MSRKYYHPAS IFFHWLIFTL VILALGVIEL KGQFPRGSEP RELCKTVHSF LGQLIFIAMA 
IRLCVRLKYG APKPLNLNKP LLVLAKGLHW TFYLLLLTLP IMGFIFLQAG GKEVHFLSWA 
WPELISPNPD IKKIFKESHE WLGNALYFLI GLHALAGLWH HYLLKDDTLR RMLNKIKPSH