| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1369 |
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| Symbol | |
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| ID | 5053650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1439782 |
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| End bp | 1440711 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640471541 |
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| Product | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase |
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| Protein accession | YP_001156147 |
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| Protein GI | 145589550 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.450037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACTCA TTACATTTAC TCGTTTAGGA TCCAGCATTG CTGAAATTGG CGCTCGCTTA
CCTCTGGATG CTGGCGATCG CATCCTCCCT TTTGTGGATG TTGCTAAAAA ACTGGGAATG
AAGCAGTTTC CATCGGATAT GAAAACGTTT TTACGCTCTG GTGACGAGGT GATGAATCAA
GCAAAATCTT GGGTTGCATC GAATGGTGAT CATTCTGATT TATTGCTCGA TGCAAATACT
ATTACTTATT TACCTCCAAT CATGGATGCT GATAAGTTTT TATGCGTTGG CAAAAACTAT
CGCACGCATT TAGAAGAGTT AAAGCGCACG AATTTGATTA AAGAAATACC GCAAGAGCCA
ACCTCTTTTA TTAAGCTCAA TTCTTGCTTG TCAGGCCACA ATGCCACAGT AGTTCGCCCC
AAGGGAATTA CGAAACTAGA TTACGAGCCT GAGTTGGTAT TTGTAATGGG TAAAAGAGCT
TTGGGGGCTA AAAAATCTGA AGCAATGGAT TACATAGGAG GTGTCACGAT CCTCAATGAC
TTAACGTGTC GTGACCTTCA GTTACGCGAA GTGGCATCAG GTTCTCGTTT TTGGACGGGT
AAAAATATTC CCGGTTTCGG ACCCTTAGGG CCAGAAATTA TCACTATCGA TGAGATCCCG
AATCCATATG ACTTATGGAT GACTTGTTCT GTAAACGGTG AAGAACGCAT GCGCGTAAAT
ACGCAGGATC AAATTTGGAA AATATCTGAC ATCCTAGAGC ACTTCTCTCG TTTTATTCCC
ATTGAAGCGG GTGATATGTT TTCTACTGGT GCACCTGGTG GCGTGGCGGT CGGTAAAGAA
AATGCAGAAG CGTTATATTT AAAGCCCGGC GATGTGGTGG AATGCGCTAT TGACGGAATT
TCAACATTAC GCACTACTAT TGCGGAATAG
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| Protein sequence | MRLITFTRLG SSIAEIGARL PLDAGDRILP FVDVAKKLGM KQFPSDMKTF LRSGDEVMNQ
AKSWVASNGD HSDLLLDANT ITYLPPIMDA DKFLCVGKNY RTHLEELKRT NLIKEIPQEP
TSFIKLNSCL SGHNATVVRP KGITKLDYEP ELVFVMGKRA LGAKKSEAMD YIGGVTILND
LTCRDLQLRE VASGSRFWTG KNIPGFGPLG PEIITIDEIP NPYDLWMTCS VNGEERMRVN
TQDQIWKISD ILEHFSRFIP IEAGDMFSTG APGGVAVGKE NAEALYLKPG DVVECAIDGI
STLRTTIAE
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