Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1356 |
Symbol | |
ID | 5053428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 1428566 |
End bp | 1429333 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640471528 |
Product | integral membrane protein TerC |
Protein accession | YP_001156134 |
Protein GI | 145589537 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0861] Membrane protein TerC, possibly involved in tellurium resistance |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.764248 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGATA GTTTTTTACC ACTCTTAAGC GACCCCAATG CTTGGGTTGC TTTTTTCACG CTATCCGCTT TGGAAATTAT TCTTGGCATA GATAACATCA TCTTTATTAG CGTTATTGCC AATCGCTTAC CAATCGAGAT TCGAGAAAAG GTGCGTCGCT TTGGTCTTCT ATTTGCCTTA TTCACTCGCA TTCTATTGTT ACTGAGTCTT TCGTGGGTAA TGGGTCTTAC TCACCCATTC TTTACGGCAT TCGATCACGC TATCAGCGGT AGAGACCTCA TTCTATTGTT GGGTGGATTT TTCCTTATCT GGAAAGCATC AAAAGAAATC TATGCCGAAG TAGAAGTAGG TGAAGAAGAC GAAGCAGATG CTGGTGCAGG CAAAGCAGAT TCGAGTAAAT CAATGTTTGC CCTCTTTATG GGCTCTGTTC TACAAATCGG GTTACTCGAC ATCATCTTTT CACTCGATAG CGTGATTACC GCTGTAGGCA TGGTCGATCA AATTAGCATC ATGATTGCTG CTGTTCTGGC TTCTGTCCTC ATCATGCTTA TTGCTGCCAA GCCTATTGGC GACTTTGTCC ATCATCACCC CTCTATTAAA GTACTAGCCC TCTCCTTCCT AACGGTCGTG GGTGTTGTAC TCATAGCAGA AGGGATGGGA GTTCATATTC CTAAGGGGTA TGTGTATGTG GCAATGGCTT TCTCACTCTC AGTAGAGCTC TTGAACATTC GTGCGCGTGA AAAGAAAAAG CTTAAGAAAA AGAATTAA
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Protein sequence | MTDSFLPLLS DPNAWVAFFT LSALEIILGI DNIIFISVIA NRLPIEIREK VRRFGLLFAL FTRILLLLSL SWVMGLTHPF FTAFDHAISG RDLILLLGGF FLIWKASKEI YAEVEVGEED EADAGAGKAD SSKSMFALFM GSVLQIGLLD IIFSLDSVIT AVGMVDQISI MIAAVLASVL IMLIAAKPIG DFVHHHPSIK VLALSFLTVV GVVLIAEGMG VHIPKGYVYV AMAFSLSVEL LNIRAREKKK LKKKN
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