Gene Pnuc_1351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1351 
Symbol 
ID5053292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1425652 
End bp1426701 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content45% 
IMG OID640471523 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_001156129 
Protein GI145589532 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.474157 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATACAA ATCGAAGAGA TGCACTGAAA TTGGGTGCAT CCGCTGCCTT GAGTGGCATG 
CTCATTTCTA ATGCTGTTGC TGCTCCAGAT GAGCGTCAAC CTATTGTGGT TGAGCCATTA 
ACTGGCAAGG CAGGTTTCCG AGTTGCCAAC TATTTACCAA GGATGGGCGC AAGTTCCAGA 
TTAGGTTTAG TCACTAATGA TGGCTTAGTA GTGGATATCC CAGCTGAAGC TGCACGCCAA 
AAAATACAAC TGACGTTTGA TCCTACTTCA ATGATTTCTT TGGCGGGTTC AGGCAATCAA 
GGCTTACTTC AATTAGCTGC GATCTTTAAA AATCGTGGAT CCAATTTAGC AAACGTAAAC 
CAAGTGATCT TGTTATCACC CATTCCTAAG CCTCAAGCCA ATATTTACTG CGTAGGTTGG 
AATTACTTAG ATCATTTTGA AGAAGGCCTA AAGCATCGCG CTGATACTGC GGTTAAAGAG 
TATCCAAAGG TACCCGTGCT TTTCACTAAG GGCACTCAAA CAATGAATGG GCCATTCGAC 
AACATTCCTT ATGATGCTGG TATCTCTACC ATGATTGACT GGGAAGCAGA GCTGGCTGTC 
GTCATTGGCA AGAAGGGAAA AAATATCTCG GAAGAAAATG CAATGGATTA TGTCTTTGGT 
TATTCAGCTT ATAACGACAC CACTGCGCGC GATATTCAGC AAAAGCGTCA GTCCGGTCAG 
TGGTTTAAGG GTAAGAGTTT GGATGGCCAT GGACCTATGG GCCCATGGGT TGTGACTGCG 
GGCGGAGTGA ATTTGGATGA CACACGCATT ATTTGCAGTG TGAATGGTGT AGAAAAACAA 
AACGCCAGCT ATAAGCAGAT GTATTTCAAA ATCCCCGCCA TTATTGCTGA ACTTTCTCGT 
GGTCTGACTT TATTGCCTGG CGATATTATC GCCACTGGCA CACCTTCTGG TGTAGGTGCC 
GGAAGAACTC CTCAAGAGTT CATGAAGCCG GGCGATATGA TGGAAACTAA TATCACCGGC 
ATCGGTATTT TGCGCAATAA GATTGGCTGA
 
Protein sequence
MDTNRRDALK LGASAALSGM LISNAVAAPD ERQPIVVEPL TGKAGFRVAN YLPRMGASSR 
LGLVTNDGLV VDIPAEAARQ KIQLTFDPTS MISLAGSGNQ GLLQLAAIFK NRGSNLANVN 
QVILLSPIPK PQANIYCVGW NYLDHFEEGL KHRADTAVKE YPKVPVLFTK GTQTMNGPFD 
NIPYDAGIST MIDWEAELAV VIGKKGKNIS EENAMDYVFG YSAYNDTTAR DIQQKRQSGQ 
WFKGKSLDGH GPMGPWVVTA GGVNLDDTRI ICSVNGVEKQ NASYKQMYFK IPAIIAELSR 
GLTLLPGDII ATGTPSGVGA GRTPQEFMKP GDMMETNITG IGILRNKIG