Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1349 |
Symbol | |
ID | 5053143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 1423030 |
End bp | 1424004 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640471521 |
Product | hypothetical protein |
Protein accession | YP_001156127 |
Protein GI | 145589530 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCAGAA ATATCCTCGT TTTTATCGCT GCAGGACTCT TTTCGTTGGT GGCGCTTGCC CAAAATACCT CTTGGCCGGC CCCAAATCGC CCTATTACCT TTATTAACCC CTTCCCCCCA GGTGGGGCAG TCGACGCTTT TGGTCGCCCC TTGGCCAAGC AGCTTTCCAC CCAGTTAAAC GACTCTATTG TTGTCGACAA TCGTGGTGGT GCTGGCGGAA CCTTAGGCGC GGCCGTAGCT GCAAAAATGG CACCTGATGG ATATACCTGG CTACTGGGCG CAGTTCATCA CTCCATCGCA CCGAGTATGT ATACGAATTT ATCGTATGAC ATCACCAAAG ATTTTGAACC GATTGCCATC ATCGGAAGCG TTCCTCATGT GATTGTTGTC AATCCTAATA AATTTCCAAA AAATGATTTG AAATCCATCA TCGAAGAGAT TCGAAAAAAC CCAGGTAAAT ATAACTATGC ATCTACCGGT AATGGCACAT CTCAACATTT AACTGGCGAA CTGTTTAAGA TGAATAATAA ATTGTTCATC ACCCATATTC CCTATCGTGG CACCGGTCCA GCATTGCAAG ATGTTGTCGC GGGTCAAGTC GACATGATGT TTGATACCCT GGCTGGCGCT GCCCCATTTA TTAAAAGCGG ACAGCTCATC GCCGTCGCTG TCGCAAGCAA CAAACGTAGC GAAGCCTTTC CGAATGTACC CACCGCGCAA GAGCTAGGGA TCTCAAATTT TGTGGTCTCC AGTTGGTACG CGCTTTGGGC GATTAAGGGC ACTCCAAAAG ATATCGTTGA TAAAATGAGT GCAGAGGTTC AAATAGCCTT AGCCTCACCT GAGATCAAAG AGCGCTGGGC AAGTATGGGT GCAACAGTTC CTAAAATGAC TCGACCAGAG TTAACGAATT ACATCAATCA AGAAATCACT CGTTGGCGAG AGGTTGTAAA ACAATCCGGT GCTAAGTTGG ATTAA
|
Protein sequence | MIRNILVFIA AGLFSLVALA QNTSWPAPNR PITFINPFPP GGAVDAFGRP LAKQLSTQLN DSIVVDNRGG AGGTLGAAVA AKMAPDGYTW LLGAVHHSIA PSMYTNLSYD ITKDFEPIAI IGSVPHVIVV NPNKFPKNDL KSIIEEIRKN PGKYNYASTG NGTSQHLTGE LFKMNNKLFI THIPYRGTGP ALQDVVAGQV DMMFDTLAGA APFIKSGQLI AVAVASNKRS EAFPNVPTAQ ELGISNFVVS SWYALWAIKG TPKDIVDKMS AEVQIALASP EIKERWASMG ATVPKMTRPE LTNYINQEIT RWREVVKQSG AKLD
|
| |