| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1344 |
|---|
| Symbol | |
|---|
| ID | 5052854 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | + |
|---|
| Start bp | 1420350 |
|---|
| End bp | 1420895 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640471516 |
|---|
| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
|---|
| Protein accession | YP_001156122 |
|---|
| Protein GI | 145589525 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATCA TCAATAAGCC AGCATTACGT TTTTTTCTAG CGCTGGCTTT TGTTTTGAAT
GTCACCATCA GCAATGAGGC TGTTGCACAA TGGCGCCCAG CTTCTGAGGC AGGTCTGACC
CAAGCCCCAC CACTGCAACT CAATAACCTG GCAGGCAAAG CGGTCGACCT TAACGCTTTA
AAAGGCAAGG TCGTTATAGT CAATTTCTGG GCGAGCTGGT GTGAACCTTG TCGTGAAGAG
TTTTTTGAGC TCATTCAACT TCAAGAGAAC TATCAAGCTA AAGGCTTAGT TGTTTTAGCG
GTCAACCTAG CAGAAATGAA GCCTCGTATT ACCCAGTTCC TCAAAGGCAA TGGCTTGCCA
GAAAATGGGA TTGAGATTCT TCAAGATAGA AATAGTATTG CCTATAAATC CTGGAAAGCC
CGCGGCCTGC CAACCTCATT TTTAGTTGGT AAAACGAGAA AAATTGAAGG CGTCTGGATC
GGGGCGATTG AGAACGTCGA TAGCAACGAG GTGAAGGGGA AGATTGAAGT CCTTTTGCGC
CAATAA
|
|---|
| Protein sequence | MTIINKPALR FFLALAFVLN VTISNEAVAQ WRPASEAGLT QAPPLQLNNL AGKAVDLNAL
KGKVVIVNFW ASWCEPCREE FFELIQLQEN YQAKGLVVLA VNLAEMKPRI TQFLKGNGLP
ENGIEILQDR NSIAYKSWKA RGLPTSFLVG KTRKIEGVWI GAIENVDSNE VKGKIEVLLR
Q
|
|---|
| |