| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1328 |
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| Symbol | |
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| ID | 5052772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1405228 |
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| End bp | 1406127 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640471500 |
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| Product | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase |
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| Protein accession | YP_001156106 |
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| Protein GI | 145589509 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.482307 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAAAAA ATAGCAAAAT TCTATCCATC ATGAATGCTG ATGGCACAGA GACCCTCGGT
GTTGTTACCC CTAAGGGCGT AATTGATGTA AGGGCAGTAG CAAAGAAAAT GAAAATTGCA
GCCCCTGTCA CTTTGGATCA ATTACTGCAA GAAGGTAATG CCCAGGGATT TAACAAAGTG
GTTGCTAGCG CAGATCAATC TGGCGTACCT TATTTGCAGG AGTCCAATAT TACTTTTGGC
CGCTTGTTTA AGAGCCCTGG CAAGATTGTT TGTGTTGGTT TGAACTATCG CGCCCATGCA
GACGAAGTGG GAATGGTCCA TCCTCGCGTG CCACCATTAT TTAATAAGTA CAACAATAGT
TTGGCGGCGC ATAACTGCTT GTTACAAATC CCACCACCAT CAGTATCTTA TAAGCTTGAT
TATGAAACTG AGCTTTTAAT CGTGATCGGC AAACAGATGC GTAATGTACC TGAGTCTGCT
GCCCTTGATT ATGTTGCCGG TTACTGCACT TCAAATGACT TTTCATCTCG TGACTTGCAG
TTGGAGTTAC CGAGTGGTCA GTGGATGATT GGAAAAACCT TAGATCAATA TGCACCTATC
GGGCCTTATT TTGTGACTGG AGATTTGGTG GGTAATCCAA ATAATCTTCA GGTAAAAACC
TGGGTGAATG GTGAGTTACG TCAAAACTCG AATACATCTG ACTTTATTCA CAACACACAA
AAGATGCTTT CGTATATCAG CACCTATTGG GCTTTAGAGC CAGGTGATAT TGTCTTTACA
GGCACTCCAC AAGGAGTAAT AGCAGGTATG CCAAAAGATA AGCAGGTCTG GCTGAAAAAG
GGCGATAAAG TGGTGAGTTC TGTAGAGAAG TTGGGCGAGT TGAAGTTCAC CCTTGCTTAA
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| Protein sequence | MVKNSKILSI MNADGTETLG VVTPKGVIDV RAVAKKMKIA APVTLDQLLQ EGNAQGFNKV
VASADQSGVP YLQESNITFG RLFKSPGKIV CVGLNYRAHA DEVGMVHPRV PPLFNKYNNS
LAAHNCLLQI PPPSVSYKLD YETELLIVIG KQMRNVPESA ALDYVAGYCT SNDFSSRDLQ
LELPSGQWMI GKTLDQYAPI GPYFVTGDLV GNPNNLQVKT WVNGELRQNS NTSDFIHNTQ
KMLSYISTYW ALEPGDIVFT GTPQGVIAGM PKDKQVWLKK GDKVVSSVEK LGELKFTLA
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