Gene Pnuc_1327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1327 
Symbol 
ID5052201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1404307 
End bp1405104 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content45% 
IMG OID640471499 
Productclass II aldolase/adducin family protein 
Protein accessionYP_001156105 
Protein GI145589508 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGAT TATTCAGCCT TGCAGTTTTT TTGATGGTTA CACATACCCA TGCTGCAAGC 
GTCCAAGAGC AAATGGAGCA AAATCCTGCT GTCAAGGCTG CAGTTGAAGA GCTAGTTTTA
GCAAACCATA TTTTGTATGA TCAGAATGCT GTTGATGGCT ATGGTCATAT TAGTGTGCGT
AATCCAACCA ACCCAAACAC ATTCTTTTTG GCCAGGAGTG TAGCCCCTTC AGTCGTGCAG
GTGGACGACA TCATGGAGTT TGATATGAAT GGCAAAGCTC TGAATGGGGA TACACGAGTT
GCTTATGGCG AGCGCTTTAT TCATAGCGGT ATTCTTAAAA ACCGTCCCGA TATTAATTCT
GTTATTCATG GCCATGCAGC ATCCACCCTA ACATACGGAT TGACGGGGAC AACTTTAAAG
CCGGTCTATC ACATGAGCGC ATTTTTAGGT GAGGGCGCTC CTATTTTTGA GATTCGGAAT
TTTGCTAAGC CAAACCCAGA TACCGATATG TTTATCAGCA ATGTTGAGTT GGGTAATGAT
TTGTCGCAAA CCATGGGTTT GCAGTACTTT GTCTTGATGC GCGGTCATGG GTACGCAGCA
GGAGCAGATT CTATTAAAAA GGCGGTATTT AGAGCTGTTT ATGCCATTCA GAACGCCAGT
ATCCAGGCTG AAGCAATGAA GATGGGACAA GTTCAATACC TCACACCAGG CGAGGCAGTC
ATCGCGCAGG AAACGATTGA AAAGACAATC AACCGCCCAT GGCAGTTGTG GAGTGAGCGC
GTCAAGAAAA CGCAATAA
 
Protein sequence
MKRLFSLAVF LMVTHTHAAS VQEQMEQNPA VKAAVEELVL ANHILYDQNA VDGYGHISVR 
NPTNPNTFFL ARSVAPSVVQ VDDIMEFDMN GKALNGDTRV AYGERFIHSG ILKNRPDINS
VIHGHAASTL TYGLTGTTLK PVYHMSAFLG EGAPIFEIRN FAKPNPDTDM FISNVELGND
LSQTMGLQYF VLMRGHGYAA GADSIKKAVF RAVYAIQNAS IQAEAMKMGQ VQYLTPGEAV
IAQETIEKTI NRPWQLWSER VKKTQ