Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1327 |
Symbol | |
ID | 5052201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 1404307 |
End bp | 1405104 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640471499 |
Product | class II aldolase/adducin family protein |
Protein accession | YP_001156105 |
Protein GI | 145589508 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGCGAT TATTCAGCCT TGCAGTTTTT TTGATGGTTA CACATACCCA TGCTGCAAGC GTCCAAGAGC AAATGGAGCA AAATCCTGCT GTCAAGGCTG CAGTTGAAGA GCTAGTTTTA GCAAACCATA TTTTGTATGA TCAGAATGCT GTTGATGGCT ATGGTCATAT TAGTGTGCGT AATCCAACCA ACCCAAACAC ATTCTTTTTG GCCAGGAGTG TAGCCCCTTC AGTCGTGCAG GTGGACGACA TCATGGAGTT TGATATGAAT GGCAAAGCTC TGAATGGGGA TACACGAGTT GCTTATGGCG AGCGCTTTAT TCATAGCGGT ATTCTTAAAA ACCGTCCCGA TATTAATTCT GTTATTCATG GCCATGCAGC ATCCACCCTA ACATACGGAT TGACGGGGAC AACTTTAAAG CCGGTCTATC ACATGAGCGC ATTTTTAGGT GAGGGCGCTC CTATTTTTGA GATTCGGAAT TTTGCTAAGC CAAACCCAGA TACCGATATG TTTATCAGCA ATGTTGAGTT GGGTAATGAT TTGTCGCAAA CCATGGGTTT GCAGTACTTT GTCTTGATGC GCGGTCATGG GTACGCAGCA GGAGCAGATT CTATTAAAAA GGCGGTATTT AGAGCTGTTT ATGCCATTCA GAACGCCAGT ATCCAGGCTG AAGCAATGAA GATGGGACAA GTTCAATACC TCACACCAGG CGAGGCAGTC ATCGCGCAGG AAACGATTGA AAAGACAATC AACCGCCCAT GGCAGTTGTG GAGTGAGCGC GTCAAGAAAA CGCAATAA
|
Protein sequence | MKRLFSLAVF LMVTHTHAAS VQEQMEQNPA VKAAVEELVL ANHILYDQNA VDGYGHISVR NPTNPNTFFL ARSVAPSVVQ VDDIMEFDMN GKALNGDTRV AYGERFIHSG ILKNRPDINS VIHGHAASTL TYGLTGTTLK PVYHMSAFLG EGAPIFEIRN FAKPNPDTDM FISNVELGND LSQTMGLQYF VLMRGHGYAA GADSIKKAVF RAVYAIQNAS IQAEAMKMGQ VQYLTPGEAV IAQETIEKTI NRPWQLWSER VKKTQ
|
| |