| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1320 |
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| Symbol | |
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| ID | 5053465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1398493 |
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| End bp | 1399530 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640471492 |
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| Product | alpha/beta hydrolase fold |
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| Protein accession | YP_001156098 |
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| Protein GI | 145589501 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.543574 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTTCA TTAGAGCCAT TCTTATTGCT TGTGCGCTGC CGCTAATATT GGCGGCATGC
GCAAGCACAG AGCCACCTTC TAATACTGTA TCTGCAAGTT TATATAAAGA TGCAGCTCCT
TTAGATTTGC GTCTCAGTAA TTTGCCTTAC CCCTATCCTG TAAAAGAATT TCAGACTCGT
TTGCAAGGGC AGGCTGTCAC GATGGCTTAT ATGGATGTAA AGGCGGTCGG TAAGCAACGG
GGTGTGGTCC TGTTATTTCA TGGAAAGAAT TTCTCAAGTG ATTATTGGGC CCCCACTATC
ATAGGCTTAA CGCAGGCGGG CTATAGAGTC ATTGCCCCAG ATCAAATTGG CTTTGGTAAA
TCATCCAAGC CGAATGTTTC ATATCATTTT GATAACTTGG CAGCCAATAC CAAGGCTTTA
TTGAATGCTC TGCAGATTAA TCATGTCTCT GTCATTGCTA ATTCTATGGG CGGCATGTTG
GGCATTCGCT TTTCCAGGCT CTATCCACAA ACAGTACAAA AGCTTGTACT TGAAAATCCA
CTTGGTTTAG AGGATTACAG CAAAGATATA CCTCCCCAGG ATAATGACAA TTTATTAAAG
CTGGAAATGG CTCAAACAGA AACGAGTTAT CGACGCTTTC TACAAAGCTA CTTTCCCAAT
TGGAAGTCAG GGTATGAGAA GTTTGTAGAG GTTTATGTAC GCGTACAAAA AGGGCCGGAC
TATCCTGCTT ACGCACAAAC TTCAGTCTTA ACTTATCAAA TGATCGCTGA AAAACCAGTT
GTGAACGATT TACCTTCTCT TCAGATGCCG GTACTGTTAA TTATTGGACA ACAAGACCGC
ACCGTTTTCG GAAGGCGCTT TGCACCCCCC GAAGCGGTCA AATCTTTAGG CAACTTTCCG
GAGTTAGGAA AAAAAGCTCA GAAAGTAATT CCGAATGCAA CCCTAGTGCC AATTGACAAT
GTGGGTCACG TTCCTCATGT TGAAGTGCCA GTGCTCTATG TAAATACCGT TGTGCAATTC
TTAAATCAAC CGCAGTAA
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| Protein sequence | MSFIRAILIA CALPLILAAC ASTEPPSNTV SASLYKDAAP LDLRLSNLPY PYPVKEFQTR
LQGQAVTMAY MDVKAVGKQR GVVLLFHGKN FSSDYWAPTI IGLTQAGYRV IAPDQIGFGK
SSKPNVSYHF DNLAANTKAL LNALQINHVS VIANSMGGML GIRFSRLYPQ TVQKLVLENP
LGLEDYSKDI PPQDNDNLLK LEMAQTETSY RRFLQSYFPN WKSGYEKFVE VYVRVQKGPD
YPAYAQTSVL TYQMIAEKPV VNDLPSLQMP VLLIIGQQDR TVFGRRFAPP EAVKSLGNFP
ELGKKAQKVI PNATLVPIDN VGHVPHVEVP VLYVNTVVQF LNQPQ
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