| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1311 |
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| Symbol | |
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| ID | 5052655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1389954 |
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| End bp | 1391345 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640471483 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001156089 |
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| Protein GI | 145589492 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCACT TTAAGCTATC GCGCTTACGC GAGGACGTCC CTGCTTTACT CAAATTAGCT
GGGCCTTTAC TCATTGGTCA ATTAGCAGTT ATCGCTTTTG GCGTACTAGA TACCGCAATG
ACAGCACGCT ACTCTGCGGA TGATCTTGCA GCGCTTGCAA TGGCTTCAGC GATATTTATC
AGCATCTATG TTGGTTTAAC TGGTGTCATC TCCGCCTTAG CTCCCATTGC TGGGCAATTA
TTTGGGGCCA AACGATTTGA TGAGATTGGA GAAGAAGTAA GGCAAGCCAC TTGGCTTGCT
TTTGGCCTAG CAGTCTTAGG ATGCTTTGTT TTACTCAACG CCGATCATCT ACTGTCCATC
TCCCATGTGG GTCCGGAGAT AGAAGGCAAG GCACGCCTCT ATCTCAATAT ATTGGCCTTA
GGCTTGCCTG CGAGCATGGG TATGCGCGTG CTAATGGCGC TCCATAACGC AGTATCCCGT
CCCGCTGTTA TTACCGTAGT GCAAATAATT GGTTTGGGAT TAAAGATTCC ATTGAACCTA
CTCTTTATAT ACGGTGGTCT AGGCATTGAA GGCATGGGTG GCCCAGGCTG TGCCGTGGCT
ACTGTGATTA TCAACTGGTC ATGGCTTTTA ATGACTTTGG GGTTTGTTCT TTTCGATCGC
TTCTATCATC CGTTCCGTAT CTTTGAACGT TTTAGCCTTC CTGACTGGCA TCGTATTTGG
ACTTTGCTCA AACTAGGAGC GCCGATTGGC TTTAGTTATT TAATTGAAGT GACTTCATTC
ACTTTCATGT CTTTATTTAT TGCGCGCTTA GGTACAACTG CCTTAGCTGG GCATCAAATT
GTGGCAAACA TGGGAACGGT CATTTATATG GTGCCCCTCT CCCTTTCTAT TGCAACAATG
ACTTTAGTAT CCCAATCGAT TGGGGCTAAT AAACCTGAGC GTGCCGAAGA AATTGGCTGG
TCATCTGTAT TTTTTACAAC TGCTTTGTGT ATCACGATAG GCTTTGCTGT CTGGATATTC
CGCATGCAAC TACTCGATCT CTACGATCCA CCAGCTGAGA TTAAAGTATT TTCCATACCG
CTATTTTTGT TTATCGCCTT CTACCAAGTA TTTGATGCAC TGCAAGTGAC TGCTGCATTT
ATTCTGCGAG CCTATCGTAT TGCCTTCTGG CCAATGCTGA TTTATGCCGG CTCACTCTGG
GGTGTAGGGC TTGGCGGCGG CTATTTGATG GGATTCAATG TATTTGGAAA TACCCCCACC
TTTTTACAAG GTGCCAATGG CTTCTGGGCT GGCAATAGTA TTAGCTTAGG CTTAGCCGCT
TGCTTGCTAC TCTATCTTTT CAGAAGAACG GCGGAGCGCT ATGAGAAAAC ACATCCGCCG
GTAGAGGCTT AG
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| Protein sequence | MLHFKLSRLR EDVPALLKLA GPLLIGQLAV IAFGVLDTAM TARYSADDLA ALAMASAIFI
SIYVGLTGVI SALAPIAGQL FGAKRFDEIG EEVRQATWLA FGLAVLGCFV LLNADHLLSI
SHVGPEIEGK ARLYLNILAL GLPASMGMRV LMALHNAVSR PAVITVVQII GLGLKIPLNL
LFIYGGLGIE GMGGPGCAVA TVIINWSWLL MTLGFVLFDR FYHPFRIFER FSLPDWHRIW
TLLKLGAPIG FSYLIEVTSF TFMSLFIARL GTTALAGHQI VANMGTVIYM VPLSLSIATM
TLVSQSIGAN KPERAEEIGW SSVFFTTALC ITIGFAVWIF RMQLLDLYDP PAEIKVFSIP
LFLFIAFYQV FDALQVTAAF ILRAYRIAFW PMLIYAGSLW GVGLGGGYLM GFNVFGNTPT
FLQGANGFWA GNSISLGLAA CLLLYLFRRT AERYEKTHPP VEA
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