| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1310 |
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| Symbol | |
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| ID | 5053227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1388231 |
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| End bp | 1389949 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640471482 |
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| Product | putative inner membrane transmembrane protein |
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| Protein accession | YP_001156088 |
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| Protein GI | 145589491 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCAAAC TCACCGCCGC CGCCACTAAA TCGATCCCGC GCATTATTAT TTTTGCGCTG
ACATTGGTAT ATGGTTTTTC TGGCCTCTTC TTTCGTGATC CATGGAAAAA TGAAGATGCC
ATTGGCTTTG GCGGTATGTG GTCTCTATTT CGTGGTAACT CGATTGATTG GGTCGTCCCT
CACTTAGCAG GTCGCAACAT CTCTTTAGGC ACCCCACTTC CTTACTGGAT GGGTGCTGGT
CTCATCGAAT TATTTGGTCA GTATATTGGC GCTGCAAATG CTGCTCGCTT ATATTCAGCG
ATTTGCTTTT TCTCTGCTGC ACTGGCTATT TGGTATGCCA CTTACTTATT AGGTCGTCGG
CGCGAAGTTC AGCCTATGGC GCTAGCAATG GGTGGACAGC CTGATTTAAA AAGCTATGGG
ATGACGTTGG CTGATGGCGC TTTGCTCATC TTCTTGGCTT GCGTTGGCCT CGCTCAGCGC
GCGCATGAAA CCACACCAAT GATGGCGCAA CTGATGGGCA TCAGTATTGT TCTTTACGGC
ACTGTGCGCG GCTTAGATAA GCCTTGGCAA GGCGGTCTAT GGACAGGTCT AGGCATCACG
ATTGTGGCTT TATCGAGCAA CCTCACCTTA AGCCTAATCA TTGTTACCTC CACGATCATC
GCCGTCATTG CAAGTAATGC TAAGTTACGC TTTCGCTGGA CATTAGCAAG TACTGTTTTA
GGCTTAATCG GCTTTGCGCT TTGGCCGATC ATCTGGTATT TGGCTGGTCT ACCAACAGAA
TGGCGCCATA TCGCAGAAGA AGGTTGGCGC AATACTCCCG AGATGCGCTC CACTCCTTCA
CTAGAATCGC TTGGGTTTTT AAGTATTAAT TTCTGGGCTT ACGCATGGCC TGTGTGGCCG
CTAGCAATGA TTTCTTTAGC CCACTGGGGT CGAGTCAAGG CTGCAGGCGC ATGGCGTGCA
CCACATCTTT GCATTCCCCT CAGTTTATTT ATTGGCAGCT TGATCTATGT AATTTTTCGT
CTTGAGGCGA ATGAGCATGA TCTGATGATC TTGATACCAA GCCTTTCGAT CATTGCAGCA
TTTAGCTTGC CGATTTTGAA ACGTAGTGTG ATTAGCTTTA TTGACTGGCT TGCCATGTTT
AGCTTTACCT TGATTGCATT AGCGATTTGG ATTATTTGGC TAGCAAAAAT TACAGGCTAC
CCTGAGACTA CTGCAGCTAA CATCACGCGC CTATTGCCAG GCTTTGAAAG TCAGTTCAAT
TGGCTCGCGT TCATCGTGGC ACTAGCCATT ACCGGCGTAT GGTTGGCGAT CGTTCGCTGG
AGAACATCGC GTGCCCCTAA GGAAATTTGG CGCTGCCTGA TCATTTCTGC GTCAGGCACC
ACCTTAATGT GGGTTCTCCT GATGACTTTA TGGCTACCGA CGATTAACTA CGCCAAAACC
TATCGCCCCG TGTCTGCGCG CCTCTCACAA GTAGTACCGC CAGGTGCTGG CTGCATCAAT
ACCAGCAATA TTGGTATGGC GCAATTGGCC TCCTTTGACT ATTTCACCAA ACTCCCTTTG
CGTGATGACC CCAACTGTCC TTGGATGCTG ACGCATAACC AAACTGAAGC TAAGGCCTAT
GCGCAGCTGA ACAATAAGAA ACTTAATCTT CTCTGGGAAG ACCGTCGCGC AGCTGATCGT
GACGAACGCT TACGGCTTTA CGAAGTCATT CCGGAATAA
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| Protein sequence | MVKLTAAATK SIPRIIIFAL TLVYGFSGLF FRDPWKNEDA IGFGGMWSLF RGNSIDWVVP
HLAGRNISLG TPLPYWMGAG LIELFGQYIG AANAARLYSA ICFFSAALAI WYATYLLGRR
REVQPMALAM GGQPDLKSYG MTLADGALLI FLACVGLAQR AHETTPMMAQ LMGISIVLYG
TVRGLDKPWQ GGLWTGLGIT IVALSSNLTL SLIIVTSTII AVIASNAKLR FRWTLASTVL
GLIGFALWPI IWYLAGLPTE WRHIAEEGWR NTPEMRSTPS LESLGFLSIN FWAYAWPVWP
LAMISLAHWG RVKAAGAWRA PHLCIPLSLF IGSLIYVIFR LEANEHDLMI LIPSLSIIAA
FSLPILKRSV ISFIDWLAMF SFTLIALAIW IIWLAKITGY PETTAANITR LLPGFESQFN
WLAFIVALAI TGVWLAIVRW RTSRAPKEIW RCLIISASGT TLMWVLLMTL WLPTINYAKT
YRPVSARLSQ VVPPGAGCIN TSNIGMAQLA SFDYFTKLPL RDDPNCPWML THNQTEAKAY
AQLNNKKLNL LWEDRRAADR DERLRLYEVI PE
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