| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1308 |
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| Symbol | rho |
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| ID | 5053130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1386367 |
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| End bp | 1387629 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640471480 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_001156086 |
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| Protein GI | 145589489 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATTAA CTGAACTCAA AGTCCTCCAC GTATCCGCCC TGCTCGAAAT GGCAGCAAGT
CTGGAGATTG AAAATACCCA ACGGATGCGC AAACAAGAAC TGATGTTTGC GATTCTGAAG
AAACGCGCGA AGGCTGGTGA AACTGTTTTC GGCGACGGTA CATTAGAAGT GTTGCCAGAT
GGCTTTGGCT TCTTGCGTTC TCCTGAAGCC TCTTATATGG CTTCACCCGA TGATATTTAT
ATCTCCCCAG CGCAGATCCG CCGCTTTAAC TTACATACTG GTGATAGCGT TGAAGGTGAA
GTGCGAACAC CAAAAGATGG TGAACGTTAC TTTGCATTGG TCAAGGTGGA TAAGATTAAC
GGTTTGGCTC CAGAAGCCCT TAAGAACCGC ATCATGTTCG AAAACTTAAC GCCATTGCAC
CCTAACCGTG TAATTAGCCT AGAGCGTGAC ATCAAGGCAG AAGAGAATCT GACTGGCCGC
ATCATCGACA TGATCTCCCC AATCGGTTAC GGCCAACGTG GACTGATCGT GGCATCACCG
AAGTCTGGTA AGACGGTGAT GATGCAGCAC ATTGCTCATG CAATTGCAGC AAATAATCCT
GAAGCTATTT TGATCGTCTT GCTCGTTGAC GAGCGTCCTG AAGAAGTGAC TGAAATGCAA
CGCTCTGTTC GCGGTGAAGT TGTTGCCTCT ACTTTTGATG AGCCAGCAGT TCGCCACGTT
CAAGTTGCTG AGATGGTGAT TGAAAAAGCA AAACGCTTAG TAGAGATGGG TAAAGATGTC
ATCATCTTGC TTGACTCGAT TACCCGTTTA GCACGCGCCT ACAACACCGT TGTTCCTTCA
TCAGGCAAAG TACTTTCTGG TGGTGTGGAT GCCAATGCAT TGCAACGTCC AAAGCGTTTC
TTCGGTGCCG CTCGTAATAT TGAAGAAGGT GGCTCATTGA CCATCATCGC TACCGCCTTG
ATTGAAACAG GCAGCCGTAT GGATGACCTC ATCTACGAAG AGTTCAAAGG TACCGGCAAT
ATGGAGGTGC ACCTTGAACG TCGCTTAGCT GAGCGTCGTG TTTACCCATC GATTAATCTT
AATAAGTCAG GCACCCGCCG CGAGGAACTC TTAGTGAAGG CTGAGAATCT CCAGAAGATC
TGGGTATTAC GTAAATTACT GGCCGATATG GACGACATCG AAGCGATGAA CTTCATCGTA
GATAAGCTCA AATCCACCAA AAACAATGGC GAATTCTTCG ACCTAATGCG TCGCGGAGGC
TAA
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| Protein sequence | MQLTELKVLH VSALLEMAAS LEIENTQRMR KQELMFAILK KRAKAGETVF GDGTLEVLPD
GFGFLRSPEA SYMASPDDIY ISPAQIRRFN LHTGDSVEGE VRTPKDGERY FALVKVDKIN
GLAPEALKNR IMFENLTPLH PNRVISLERD IKAEENLTGR IIDMISPIGY GQRGLIVASP
KSGKTVMMQH IAHAIAANNP EAILIVLLVD ERPEEVTEMQ RSVRGEVVAS TFDEPAVRHV
QVAEMVIEKA KRLVEMGKDV IILLDSITRL ARAYNTVVPS SGKVLSGGVD ANALQRPKRF
FGAARNIEEG GSLTIIATAL IETGSRMDDL IYEEFKGTGN MEVHLERRLA ERRVYPSINL
NKSGTRREEL LVKAENLQKI WVLRKLLADM DDIEAMNFIV DKLKSTKNNG EFFDLMRRGG
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