| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1306 |
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| Symbol | |
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| ID | 5052217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1382639 |
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| End bp | 1385623 |
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| Gene Length | 2985 bp |
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| Protein Length | 994 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640471478 |
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| Product | hypothetical protein |
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| Protein accession | YP_001156084 |
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| Protein GI | 145589487 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3893] Inactivated superfamily I helicase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.791013 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCAGC CATTTCCGAT GCTTACTGAA CAGCAACAGC CATATAGCTG GGCTATCACG
CCTAATGCTG GTGCTCTGAA GGAACTCGCC AATGGAATTT GGAATTGTGC AGTGCAAACT
AATCAACGCC CCTTAGTGGT GCTTAGTACG GCAGGACCTT TAATGGGGGT GAGAAGGGCG
CTGGAAGTAT ATCGTCCAGC CGACTTACCC AATCACCTTG CCTTTTTGCC TCAAGTCATT
AGTTTTCAAG ATTGGCTGGA GGCTGCTCCA GGCGCATGGA AGTTTCCAAA AAAACAATCT
GATCTAGAAA GGTGGTTAGG TGTTTACTCC ACTCTGCGTA AGCACCCCGA TCTTCAGGCA
TGGTTTAAAG CTGAGAGTGA GACGGGCGCA TGGGGTCTTG CTCAAGCAAT CGTGAAGGCG
TGCGATACCT TATCGAAGGC GGTAAGTCCA CATCTTCAAA AACAGATTCA TGTATTCATG
CAGCAGTATG AAAGCGATCA AGATCAGCAG AACAAGATAG GTGAAGTTTG GGGGCGTGAA
GTTCAAACGT TGCTAGATGC CACTATTCAA GAAGCATATC GTGGCATGGC GCGTAAGGTG
GTAGACCAAG AGGCAAACGT ATTGCTTACT TTCTGGCGTT ATACCGCCAG TGTGAGTGAC
CCCGCTTTTC GCAATCAGTT TGCGATTGCA GCCCACCTTC ATGCACTTGC ACAAGCGCAA
GCAGTCCATC AAGCGCGACC ATTAATTTGG GTTGAAACCG CAGATCCCAC TCCAATTGAT
CAAGAAATTA TTGCTGATTT ACTTCATCAA TATGCTCAGC TTGCACCCGC AATAGAAGTC
AAGATGGATT GGAGCGCTGT GGGTTTGTGG CCCGAAGCAA TACAGGGCGG TGACAAGTCA
ACGCAAGCTG TCCAGAATGT GCATCATGCT CAGATTGAAG GTTGGAGACT AGTTTCTGCA
AAACGATTTG AAGAGCTGGC ATGGACTGCA GCAAAAACAA TTGAGCAGCA TCTGATTGAT
GGCAAAACCA ATTTAGCATT AGTAGCTCAA GACCGTTTAG TTGCCAGAAG GGCGCGCGCC
TTGTTGGCTA GGTTAGGGCC TGCATTAAAT ATTGCTGATG AAACTGGCTG GAAGCTTTCT
ACTACCCGCG CTGCTGCTGC ACTCAATAGT TGGCTAGAGT TAATTCAGTC ACCTAAAGAT
GGGCCAAGCG TCAAAGTTCT ACTTGAGTTC TTGCAAAATC CTTTTTTAGA TATTGAAAAA
ATCCTGAATC GAGAAAAAGA TTTCTGCATC GGATTGATTG CAGAGCTTGA AGATATTTTG
ATGGCAAGTA AAGCGGAATC CGGATGGACT ACTTTTTATT TAGCCATCGA GCGCGCACAG
CAATATGCCG TTAAAACTGC GTCTGCTATA CCAAGCTCAG CTTTGTTAGA GCTCTTGCAG
TTCGTCAGAG AGCGTCATCA TGAGTGGTCA AAACTAAAGG TTGATTGCAA TAAAGCTTAT
AAGCTTTTAC AGGCCAATCT GCAGGCCACT GGCATGGCGA CTAGCCTAGA AAAAGACTCT
GCTGGTAAAC AGTTATTAGA GGTCTTGAAG AGTTTTGATT TGCATCGCCC CGACCATCAA
CTGACTGTAA TGCGTTTGAA TGAATGGCTC AGCTTGATCA AAACGGTAGT GGAGGGTGCT
AGCTATCAAG AGGAGGGTGG GGATGCTAGG GCCAATTTGA GCATTCTGCC TCTAAGCTCT
GCCCGTTTAA GAGAATTTGA TGCCATCGTA TTGGTGGGTT GTGATGAGCA GCAGCTTCCA
GCCTATTCTG AGCCGCCTTT ATTTTTTTCG GATGCCTTAA ATCAATTGCT CAAGACATCT
ACCATTGAGA TGCAATTTGT GCAGCAAGCA AGAGATCTTT CTCAGTTATT GGTTTCATGT
AGCCAAGTCG ATTTACTCTG GCAAAGTAAA AGTAAGAATG GAGAACCTTT AAGACCTTCC
GCTTGGATTC AACGCTTACA AAGTAAAGTT GATTGGCATG CGCTGAGCCC TCAAATACAG
AAGCGGGTAT TTGAGCCCAA CCCGATTGAC ATGGCAGTAG CGCATTTTGA AGAAGATTTG
CCTATGCCGC TTTCAATGAG TCCTAGTGCT TATAAGGCAT TGCGTGATTG CCCTTATCGC
TATTACGTTC GCAGCTTATT GGGCTTGCGC AAAATAAAAA GTGTTGACGA AGGATTTGAT
GCATCGCTAG CCGGGCAGAC CTTGCATCAG GTTTTGAAAT CCTTCTATCA CTCGCTGAAA
ACGGAAGAAC ATAAAAATCC CAATCTTAAA ACGCAAGATG AGGAGCGGCA CGAATGGATG
GAGGCTCGTC TCAATATGGA GTCTGAGCAA GAGTTCGCCC CTTTAATTGA GGGTGATGCG
AGGGTAATGG GGGCCTTACG CGATTGGCAA AAGCAAATCC CGAGCTTTAT TGACTGGCAA
TTACAACGCG AGCAAGCAGG ATGGCAGTAT TTTGATGGCG AACTAAAGGT AGGTTTTGAT
TTACCTTTTG CTGATATCGA TGGCAATTTC AAAACCATTC GTATTGAAGG CTTTGCTGAT
CGATTTGATA TTCATATTGA CGATAGCAAG CTTGCTTCAG TAATTGATTA TAAGAATCAG
CGTTTCGAGC GAGTTAAGCA GCGTGCCGAA CATCTATTAG ATGATCCGCA ACTATTAATT
TATGCGCGCG CAGCGAACGA GTCTCAAGAA AATCACAAGT TGCTTGGGCG TCAAGTAAAA
CAAGCCGAGT GGGTTGCTTT AAAAGCAGAC CTCTCAAAAG AGGCGCAAAA GGCTGCTCGC
TCGCAAGAGG TTCAAGAGAT GCCTGAGATG ATGATGCAAT TTTCAGCGCA AATTACCGAA
GATGTACAGG GTCTTTGGTC TAAAAAACCA ATGCAAGCTT TTGCACCCGA AGGCGTTTGT
CAGTATTGCG AAGCTCGCGG TATTTGTAGG AAGGGGTTTT GGTAA
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| Protein sequence | MSQPFPMLTE QQQPYSWAIT PNAGALKELA NGIWNCAVQT NQRPLVVLST AGPLMGVRRA
LEVYRPADLP NHLAFLPQVI SFQDWLEAAP GAWKFPKKQS DLERWLGVYS TLRKHPDLQA
WFKAESETGA WGLAQAIVKA CDTLSKAVSP HLQKQIHVFM QQYESDQDQQ NKIGEVWGRE
VQTLLDATIQ EAYRGMARKV VDQEANVLLT FWRYTASVSD PAFRNQFAIA AHLHALAQAQ
AVHQARPLIW VETADPTPID QEIIADLLHQ YAQLAPAIEV KMDWSAVGLW PEAIQGGDKS
TQAVQNVHHA QIEGWRLVSA KRFEELAWTA AKTIEQHLID GKTNLALVAQ DRLVARRARA
LLARLGPALN IADETGWKLS TTRAAAALNS WLELIQSPKD GPSVKVLLEF LQNPFLDIEK
ILNREKDFCI GLIAELEDIL MASKAESGWT TFYLAIERAQ QYAVKTASAI PSSALLELLQ
FVRERHHEWS KLKVDCNKAY KLLQANLQAT GMATSLEKDS AGKQLLEVLK SFDLHRPDHQ
LTVMRLNEWL SLIKTVVEGA SYQEEGGDAR ANLSILPLSS ARLREFDAIV LVGCDEQQLP
AYSEPPLFFS DALNQLLKTS TIEMQFVQQA RDLSQLLVSC SQVDLLWQSK SKNGEPLRPS
AWIQRLQSKV DWHALSPQIQ KRVFEPNPID MAVAHFEEDL PMPLSMSPSA YKALRDCPYR
YYVRSLLGLR KIKSVDEGFD ASLAGQTLHQ VLKSFYHSLK TEEHKNPNLK TQDEERHEWM
EARLNMESEQ EFAPLIEGDA RVMGALRDWQ KQIPSFIDWQ LQREQAGWQY FDGELKVGFD
LPFADIDGNF KTIRIEGFAD RFDIHIDDSK LASVIDYKNQ RFERVKQRAE HLLDDPQLLI
YARAANESQE NHKLLGRQVK QAEWVALKAD LSKEAQKAAR SQEVQEMPEM MMQFSAQITE
DVQGLWSKKP MQAFAPEGVC QYCEARGICR KGFW
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