Gene Pnuc_1304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1304 
Symbol 
ID5053696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1378156 
End bp1378974 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content50% 
IMG OID640471476 
ProductTPR repeat-containing protein 
Protein accessionYP_001156082 
Protein GI145589485 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.247714 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATGC GCCATGTATT GAATGTGTTT ATTGGGCTAT TTGCCAGTGC CGTGTTACTG 
ACTAGTAACG TAGCCTTTGC TGAACCTACC TTACCTGAGG TGTATCAGGC TATTGAATCT
GGGCAACTTG CCAAAGCAGA TTCCATGATG CAAGAGGTCT TAAAAAATCA CCCGAATAGT
GGCAAGGCCC ATTACATCGC CTCTGAACTT TATCTGAAAG AGGGTAAATT AGACGCAGCC
AGAAATGCAT TTGTGCAGGC AGAAAATTTA GCGCCTGGTT TACCATTTGC GCAACCAGAA
TCAGTGCAAA AATTGCAAGC ACAATTACGA GCCGGCGCAG CGCCAGTCAG CACAGCAAAT
ACTGGTGCTA GTTCAATTTT CACTAGCCCA CTCTTTTGGA TATTGATTGC CATTCTGATT
GTGGGCGTGA TGTTCTTTAT GAAAAATCGC AATCGCCCTG ATGCCGTTCA AGTCTATAAC
GCTCCCAATG CAAATGGTCC TTATCCCGGC GCCCCCGGCG GCTATCCTCC TGGCTATCCT
GGCGCACCAG CATCTGGTAT GGGCGGTGGA CTGATGGGTA GCTTGGCTAC GGGCGCAGCG
CTCGGTGCCG GTATGGTGGC CGGTGAAGCC TTGGCAAGCC GTTTAATGGG CGGAGGCCAA
CATTCAAACC CTGGAAATAT TAATAATGAT TTCAATCAAC TCGGCGGTCA AGTAGATGCG
GCTAACTTTG GAGTGAATGA CGCTAGTTCC TGGGATGATG GCGGCGCAAG CTCTTGGGAT
GATGGCGGTG GCGGCGGTGA TTTTATGAGC GACGTTTAA
 
Protein sequence
MKMRHVLNVF IGLFASAVLL TSNVAFAEPT LPEVYQAIES GQLAKADSMM QEVLKNHPNS 
GKAHYIASEL YLKEGKLDAA RNAFVQAENL APGLPFAQPE SVQKLQAQLR AGAAPVSTAN
TGASSIFTSP LFWILIAILI VGVMFFMKNR NRPDAVQVYN APNANGPYPG APGGYPPGYP
GAPASGMGGG LMGSLATGAA LGAGMVAGEA LASRLMGGGQ HSNPGNINND FNQLGGQVDA
ANFGVNDASS WDDGGASSWD DGGGGGDFMS DV