| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1300 |
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| Symbol | |
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| ID | 5053146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1371397 |
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| End bp | 1374474 |
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| Gene Length | 3078 bp |
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| Protein Length | 1025 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640471472 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_001156078 |
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| Protein GI | 145589481 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.187575 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGTTTCG CAACGAATTT TCTAAGAGGT GTTTTAGACA AGCGCATACT AATCCTATTT
GCCTCTGCGG TACTTTTATG CTTGGGAGCA TACAGCCTAA AGCAGCTGCC TATTCAGCCT
TATCCAGGTG TAGCGCCATT AACTATCCAA GCAATTTCTC AGTGGCCAGG ACGCAGTACT
ACTGAAGTAG AACAACAAGT TACGATTCCA GTAGAAAATG CTTTAGCAGG TATTCCAGGG
GTTAAAGCAT TTCGCTCCGT TTCTTTATTT GGACTTTCTG TTGTCACGCT AAAATTTAAT
GACAATGCTG ACCCCTTTAA GGTTCGGCAA ATTTTTATTT CTAATTTGGG AAATGTAACT
TTTCCGCCGG GCGTAAGCTC AAGTGTGAGC CCTGATTCAG ATGCTACTGG CGAAATTCTT
CGCTATCAAG TGAAATCAGA CTATGCATCC CCCACTCGTC TAAAGACTTT GCAAAATTAT
GAGATCTACA AAGAGCTCAA ACAAACTCCA GGCATTGCAG ACGTTTCCTC TTTTGGCGGT
AAGGTTCGTC AGTACAACGT AATCGTTCGA CCCGAAAGCC TGCAATCCAA AAATATCACT
ATTTCTCAGT TAATTGATGC CTTATCGAAG GCAAATGACA ACACTGGAGG CGGCGTATTG
CCAAGTGGTG AACAGCAATT TGTGGTGCGT GGGGTTGGCC TACTGAAGAA CTTGGACGAT
ATTAGAAGAG TGGTTGTTGC TGTCAACAAC GGCGTTCCTG TTCGCATTGG TGATGTGGCC
ACAGTTGAAA TTGGAAATGC TCCCCGCTTG GGTTTGTTCC AGTTTGATGA AAATCCAGAC
TCGGTTGAAG GAATTGTGTA TTTACGTCGA GGTGAGAATG CCTCAGAAGT ATTAGCCCGC
GTTAGAGAAA AGATTGTCAC GATCAATGCC CATGTATTGC CGCCGGGCAT TGAGGTTAAG
CCTTTTTATG ATCGCCAGGT TCTCTTAGAT ATCACTGTGG GCACTGTTAA GCACACCATG
TTTTTTGGCA TCACTATGGT TTTGGTTTTG CTTTACATAT TCTTGGGTAA TTTCCGGGCT
GCCGCTGTCG TTGCAGCAGT TATTCCCCTG GCGCTGTGTT TTTCTTTCAT CATGATGTAC
ATATTTAATG TACCAGCCAA CTTGATTTCT TTGGGTGCGA TTGACTTCGG GGTGATCGTA
GATGCAGCTG TAATCATTAC GGAAAATGTG ATGCGTCACT TGGAAGAGGG CGGAAAGCGC
TTGAATCAAA GCATTATTTT GGCGACTGCT GAAGTGCAAA GGGCTATGGT GTATTCCACC
AGCATCATTA TTGTTGCTTA CTCACCATTA TTTTTAATGG GTGGTGTGGA GGGGATTATA
TTTAAGCCGA TGGCCTTTAC GATGGGCTTT GCCTTGATTG CCTCGATTGT TCTGAGTCTC
ACCTTCTTAC CCGCATCGAT TTCTTACGCG TTCGGTGAAA ATTTCCATCA TCAACCGCCT
AAGTTTATTA CTTGGATACT CGACCATTAC AAGCCCTTAT TGCGGCGCTT AATGGATCAC
CCTCGTCACG TCATTACTGT TTCTATTTTG GTGCTTGGCG TTACCTTAAT TAGTGCAACT
CGTTTGGGTA CTGCATTTTT ACCCACCTTA GAAGAAAATA ACATTTGGCT TCGTGTTGTC
CTGCCAAATA CTGTTGATTT AAATTATTCA ATTAGTGTTG CCAATCAGTT GCGAGAGACA
TTCACAAGGC AGCCTGAGAT AGAGCGAGTG GCTGTTCAAA TTGGTCGCCC AGATGATGGA
ACTGACTCTA CTGGAGTATT TAATCAGGAG TACGGTCTTT ATCTAAAGCC TCCTGAGCTG
ATGCCGAAGG GGTCTAGTAA GGCAGATCTA TTGAAGCGCT TACAGGGTGA GCTGGAGCGC
ATTCCTGGGA TTTCATTTAG TTTCTCTCAA TACATTCAGG ATAACGTGAA TGAGGCTCTG
TCTGGGGTGA AGGGTGAAAA CTCTGTCAAG ATTTTTGGAA CAGACTTAAC AATTCTGAAC
ACAAAGGCGC ATGAGGTCAT TGCCCAATTA AAGAAAGTGC GTGGCATTGA GGACGAAAGC
ATTCTGAAGG AGCTGGGTCA ACCAACTTTA AATATTCAGA TTGATCGCGA TAAGGCAGCG
CGATATGGGG TAAATGTGGC CGATGTGCAA ACTGTAGTTG CTAATGCCAT CGGTGGGGCC
CCAGTTTCTA ATTTCCTGGA GGACGAAAAG ACGTTTGGCA TTGCTGTGCG TTTAAATGAA
GATAGTCGAA ATGATTTGCC TGATATTGCC AATTTACTGA TTGACACTCC TGTTGGCTCC
AGAGTGCCTT TGGGGATGGT AGCAAATGTA GAGCTTACAG ATGGTCCATT CTTTATATAT
CGGGAAGCCG GTAAGCGTTA CATTGCGGTT ATTTTCAGCG TGCGTGATCG AGATCTTGGT
AGCGCAGTCG AAGATGCCAA ATATTTAGTC GAGAAGAATG TAGCGCTACC TGCAAACTAT
TCGATAGCCT GGGATGGTCA GTTTAATCAG ATGAAGGCGG CGCAACAAAA ATTAATGGTC
ATCATTCCGC TCACGCTGGT GGCAATTTTC TTGTTGTTGG TAACTGCCTT GGGTAACTTC
CGAGATGCGG TGATTGTTCT CATCAATGTC CCATTTGCAG CCATCGGCGG AATTATCGCC
CTGCATCTTG GTGGCGAAAC GCTGAGTATT TCTGCTCTAT TTGGTTTCTT ATCTTTATTT
GGTATTGCCA TTCAAGACGG CGTGATTCTG ATTTCTTATA TCAATAAGAC GGTAGCTGAA
GAGCATGGTG CTATGAAAGA TGCCATGGTT GATGGCGCAG CTTTACGTGT TCGACCTGTT
TTAATGACTG CGATGTTAGC GGGCTTGGGT CTCTTGCCTG CCGCCTTGTC TCATTCAATT
GGTTCTGAAG CACAGCGCCC ATTAGCCCTC GTCATTGTAG GCGGCATGGT AACCACTACT
ATTCTCACGC TCTTGGTGTT GCCGGTGATT TATGCGGCAA TGAGGGGTCG TGGCAAACAT
AAACCAGGAA TCGTTTAA
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| Protein sequence | MSFATNFLRG VLDKRILILF ASAVLLCLGA YSLKQLPIQP YPGVAPLTIQ AISQWPGRST
TEVEQQVTIP VENALAGIPG VKAFRSVSLF GLSVVTLKFN DNADPFKVRQ IFISNLGNVT
FPPGVSSSVS PDSDATGEIL RYQVKSDYAS PTRLKTLQNY EIYKELKQTP GIADVSSFGG
KVRQYNVIVR PESLQSKNIT ISQLIDALSK ANDNTGGGVL PSGEQQFVVR GVGLLKNLDD
IRRVVVAVNN GVPVRIGDVA TVEIGNAPRL GLFQFDENPD SVEGIVYLRR GENASEVLAR
VREKIVTINA HVLPPGIEVK PFYDRQVLLD ITVGTVKHTM FFGITMVLVL LYIFLGNFRA
AAVVAAVIPL ALCFSFIMMY IFNVPANLIS LGAIDFGVIV DAAVIITENV MRHLEEGGKR
LNQSIILATA EVQRAMVYST SIIIVAYSPL FLMGGVEGII FKPMAFTMGF ALIASIVLSL
TFLPASISYA FGENFHHQPP KFITWILDHY KPLLRRLMDH PRHVITVSIL VLGVTLISAT
RLGTAFLPTL EENNIWLRVV LPNTVDLNYS ISVANQLRET FTRQPEIERV AVQIGRPDDG
TDSTGVFNQE YGLYLKPPEL MPKGSSKADL LKRLQGELER IPGISFSFSQ YIQDNVNEAL
SGVKGENSVK IFGTDLTILN TKAHEVIAQL KKVRGIEDES ILKELGQPTL NIQIDRDKAA
RYGVNVADVQ TVVANAIGGA PVSNFLEDEK TFGIAVRLNE DSRNDLPDIA NLLIDTPVGS
RVPLGMVANV ELTDGPFFIY REAGKRYIAV IFSVRDRDLG SAVEDAKYLV EKNVALPANY
SIAWDGQFNQ MKAAQQKLMV IIPLTLVAIF LLLVTALGNF RDAVIVLINV PFAAIGGIIA
LHLGGETLSI SALFGFLSLF GIAIQDGVIL ISYINKTVAE EHGAMKDAMV DGAALRVRPV
LMTAMLAGLG LLPAALSHSI GSEAQRPLAL VIVGGMVTTT ILTLLVLPVI YAAMRGRGKH
KPGIV
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