Gene Pnuc_1298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1298 
Symbol 
ID5052641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1369956 
End bp1370612 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content49% 
IMG OID640471470 
Productprotein-L-isoaspartate O-methyltransferase 
Protein accessionYP_001156076 
Protein GI145589479 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2518] Protein-L-isoaspartate carboxylmethyltransferase 
TIGRFAM ID[TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.075528 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGGCTC CCACAGAACG CTTTGCTGCC TATCGCCAGG CTCTAGCAGC CAAGGTCCAT 
GCTAGTGGCG TGAAACATGG CAAGACTTTA GAAGCCATCG CGACCGTTCC ACGTCATGCA
TTTATGGACC CCGGTTTGCA TGCGCAAGCT TATGAAGATA CCGCTCTGCC AATAGGCCAT
GAGCAAACAA TTTCAAAACC CTCTGTAGTT GCTCGTATGA TTGAGTTATT GCACAAGCCA
AGACATAAGC TAGGCAAAGT TTTAGAAATC GGGACCGGTT GTGGGTACCA AGCTGCGGTA
TTAAGTTTGC TTGCGGATGA GGTTTATACA ATCGAACGCA TCCGGCCATT GCATGACATG
GCTAGAGCTA AGCTTCGACC TTTTCGTATT AATAACCTGC GCCTCATTTA TGGCGACGGA
ATTTTGGGAT TACCCCAAGC CGCACCGTTC GACGGGATCA TTTTGGCTGC GGCTGGTCTC
GGTATTCCTG ATGCCTTAAT GGATCAGTTG GCTATTGGAG GCCGATTAGT TGCCCCAGTT
GCCAAAAATG AGAATGAACA GCAACTGGTG GTAGTAGAGA GAATGAGTTC TCAGCGCTAT
CAAAGAACTG TACTGGACGG GGTCTTTTTT GTCCCCTTAC AATCAGGGGT AGTATGA
 
Protein sequence
MKAPTERFAA YRQALAAKVH ASGVKHGKTL EAIATVPRHA FMDPGLHAQA YEDTALPIGH 
EQTISKPSVV ARMIELLHKP RHKLGKVLEI GTGCGYQAAV LSLLADEVYT IERIRPLHDM
ARAKLRPFRI NNLRLIYGDG ILGLPQAAPF DGIILAAAGL GIPDALMDQL AIGGRLVAPV
AKNENEQQLV VVERMSSQRY QRTVLDGVFF VPLQSGVV