Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1298 |
Symbol | |
ID | 5052641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 1369956 |
End bp | 1370612 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640471470 |
Product | protein-L-isoaspartate O-methyltransferase |
Protein accession | YP_001156076 |
Protein GI | 145589479 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.075528 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAGGCTC CCACAGAACG CTTTGCTGCC TATCGCCAGG CTCTAGCAGC CAAGGTCCAT GCTAGTGGCG TGAAACATGG CAAGACTTTA GAAGCCATCG CGACCGTTCC ACGTCATGCA TTTATGGACC CCGGTTTGCA TGCGCAAGCT TATGAAGATA CCGCTCTGCC AATAGGCCAT GAGCAAACAA TTTCAAAACC CTCTGTAGTT GCTCGTATGA TTGAGTTATT GCACAAGCCA AGACATAAGC TAGGCAAAGT TTTAGAAATC GGGACCGGTT GTGGGTACCA AGCTGCGGTA TTAAGTTTGC TTGCGGATGA GGTTTATACA ATCGAACGCA TCCGGCCATT GCATGACATG GCTAGAGCTA AGCTTCGACC TTTTCGTATT AATAACCTGC GCCTCATTTA TGGCGACGGA ATTTTGGGAT TACCCCAAGC CGCACCGTTC GACGGGATCA TTTTGGCTGC GGCTGGTCTC GGTATTCCTG ATGCCTTAAT GGATCAGTTG GCTATTGGAG GCCGATTAGT TGCCCCAGTT GCCAAAAATG AGAATGAACA GCAACTGGTG GTAGTAGAGA GAATGAGTTC TCAGCGCTAT CAAAGAACTG TACTGGACGG GGTCTTTTTT GTCCCCTTAC AATCAGGGGT AGTATGA
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Protein sequence | MKAPTERFAA YRQALAAKVH ASGVKHGKTL EAIATVPRHA FMDPGLHAQA YEDTALPIGH EQTISKPSVV ARMIELLHKP RHKLGKVLEI GTGCGYQAAV LSLLADEVYT IERIRPLHDM ARAKLRPFRI NNLRLIYGDG ILGLPQAAPF DGIILAAAGL GIPDALMDQL AIGGRLVAPV AKNENEQQLV VVERMSSQRY QRTVLDGVFF VPLQSGVV
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