| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1297 |
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| Symbol | |
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| ID | 5053082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1369147 |
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| End bp | 1369959 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640471469 |
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| Product | peptidase M23B |
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| Protein accession | YP_001156075 |
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| Protein GI | 145589478 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0650361 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATCTA TATTGAATCC AATGTCCAAC GTCATGCCAA ACACTGTTTC TAAAAGTCTC
TTGATTTTGT TCCTGACCGC ATCTTTGATG CTGACAGTGG GTTGCTCTAC ACCTCGCACG
AAGCCTGCAA GCGTTACAGA CCGCAGTGGC GGATCTAGCG AACCTGCACC TCCTGGCTAC
TATCGGGTGA AAAGGGGTGA TACCTTGGCA CGCATTGCCT TGGATAATGG TCAAGCGCCT
CGAGATGTTG TGCAGTGGAA CAAGGCTATT AATCCAAGCT TTAATCCAAA CATTATTGAA
ATTGGCGATT TAATTTTGAT TAAAGCACCG GCTGGTTCTA AGCCAGTAAA AGTGGCTGAG
AAAGTAACTG AGAAAAAGCC AATCCCTGTA ACCGATAAAG CAGATGTACC AAGCCCTACA
CCGGAGCCCA CTAAATCAGA AGTAGTTGCA GAGCCAGGTA TTCGATTGTC TTGGCCAGCT
AAAGGTAAAG TCACTGATGA CTTTAGTGAT AAAAATAAAG GTATTGATAT TGCTGGAAAA
GTGGGTGAGC CAGTCTTAGC TGCTTCGGAT GGCAAAGTGG TTTATGCCGG CAACAGTTTG
CGTGGTTACG GCAATTTAGT CATTGTTAAA CATGACAATA CGTATCTCAC TGCCTATGCA
CACAACAGTA AGCTTCTAGT AAAAGAGGGT GATACGGTTC GCAAAGGTCA AAAGATTGCG
GAGATGGGCG ATACCGATAC GACTTCTGTA AAGCTCCATT TTGAGTTGCG TGTAAACGGC
AAGCCAGTAA ACCCTACACC GTACTTGCAG TAA
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| Protein sequence | MRSILNPMSN VMPNTVSKSL LILFLTASLM LTVGCSTPRT KPASVTDRSG GSSEPAPPGY
YRVKRGDTLA RIALDNGQAP RDVVQWNKAI NPSFNPNIIE IGDLILIKAP AGSKPVKVAE
KVTEKKPIPV TDKADVPSPT PEPTKSEVVA EPGIRLSWPA KGKVTDDFSD KNKGIDIAGK
VGEPVLAASD GKVVYAGNSL RGYGNLVIVK HDNTYLTAYA HNSKLLVKEG DTVRKGQKIA
EMGDTDTTSV KLHFELRVNG KPVNPTPYLQ
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