| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1290 |
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| Symbol | |
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| ID | 5053350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1361275 |
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| End bp | 1362603 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640471462 |
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| Product | histidyl-tRNA synthetase |
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| Protein accession | YP_001156068 |
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| Protein GI | 145589471 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0124] Histidyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.315921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGATC AAAACAAACC AGAAAAAGTC CAGAAGACGC AAAAAATAAA TGGCGTGCGC
GGCATGAATG ATTTGCTGCC AGCAGATGCT GCGCATTGGG CACACCTTGA TCATGTGCTA
CGCGATTTAA CCCGTGCCTA TGGCTATGAA TTTTTGAGAA CGCCCATTGT TGAGGCAACA
GCAGTATTTC AACGCGGTAT TGGTGAAGTC ACCGACATTG TTGAAAAAGA AATGTATTCC
TTTGAGGATC GATTAAATGG TGAGCAACTC ACTTTACGTC CCGAGGGAAC AGCTGCAGTA
GTACGCTCTG TAATTGAAAA TAATTTACTG TACGAAGGAC CAAAGCGCCT TTGGTATACA
GGCCCTATGT TCCGTCATGA GCGTCCACAG CGCGGTCGTT ATCGTCAATT TCATCAGTTC
GGGATTGAGG CCTTAGGTTT TGCAGGTCCT GATATTGATG CTGAGATCAT CTTGATGGGT
CAACGTCTTT GGGATGAATT GGGTCTTAAA GGGGTTCGTC TAGAAATTAA CTCCCTAGGG
CAAGCCAATG AGCGCGCTGA ACATCGTGCA GCCTTGATTA AATATTTCGA GAAACATCAA
TCTCAATTAG ATGAAGATTC ACGACGTCGC CTTCTTACCA ATCCTTTGCG TATTTTGGAT
TCTAAAAATC CCGAAATGCA GACATTAATT GACGGTGCAC CACAGCTATT AGATTTTTTG
GGTGAAGAGT CGCTCAAGCA CTTCAATGCA GTACAAGCCT TACTAAAAGC AAATAATATT
CCGTGCAAGA TTAATCCTCG TTTAGTTCGT GGACTCGATT ACTACAACCT CACCGTGTTT
GAATGGGTGA CTGAAGAGTT GGGCGCACAA GGAACTATTG CAGGCGGTGG TCGTTATGAT
CCCCTGATTG AGCGTATGGG TGGTAAAGCT GCCCCTGCTT GTGGTTGGGC AATGGGAATG
GAACGGGTTT TAGAGTTGAT GAAGGTTTCT GGTTCTTTAC CAGAAGCCCA AGCTCAATGC
GATATTTTTG TATTGCATCA GGGCGGAGAA ACCTTGACTG CAGCAATGAT TATTGCTGAG
CGTTTGCGTA GCGCTGGAAT CGATACCATC CTTTTTTGCC CTCCAGATGG TCAATCTGCC
AGTTTTAAGT CGCAAATGAA GAAGGCAGAT GCTAGTGGTG CTGCTTTTGC TGTGATTATT
GGGCCTGATG AACTGGCCAA AAATGAAGCT CAACTCAAAG ACCTAAGGGG TACCGGGGAG
CAGAAGTCTG TCCCGCTGGA TGAGGTCCTG GGAGCAGCAA TTGATGCCTT AGTAGGCGCC
TCCGAATAG
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| Protein sequence | MTDQNKPEKV QKTQKINGVR GMNDLLPADA AHWAHLDHVL RDLTRAYGYE FLRTPIVEAT
AVFQRGIGEV TDIVEKEMYS FEDRLNGEQL TLRPEGTAAV VRSVIENNLL YEGPKRLWYT
GPMFRHERPQ RGRYRQFHQF GIEALGFAGP DIDAEIILMG QRLWDELGLK GVRLEINSLG
QANERAEHRA ALIKYFEKHQ SQLDEDSRRR LLTNPLRILD SKNPEMQTLI DGAPQLLDFL
GEESLKHFNA VQALLKANNI PCKINPRLVR GLDYYNLTVF EWVTEELGAQ GTIAGGGRYD
PLIERMGGKA APACGWAMGM ERVLELMKVS GSLPEAQAQC DIFVLHQGGE TLTAAMIIAE
RLRSAGIDTI LFCPPDGQSA SFKSQMKKAD ASGAAFAVII GPDELAKNEA QLKDLRGTGE
QKSVPLDEVL GAAIDALVGA SE
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