| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1283 |
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| Symbol | |
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| ID | 5053325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1354020 |
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| End bp | 1354889 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640471455 |
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| Product | HflC protein |
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| Protein accession | YP_001156061 |
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| Protein GI | 145589464 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.368114 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAGA ATCGCCTGAT TGCTGCTGGT ATCGCCTTCA TTGCCTTGAT CTATGTGCTT
TCTTCAAGCA TTTTTATTGT TGATCAACGC ATGTTTGCGG TCGTGTTCTC ATTTGGACAA
ATCGTACGCG TGATTGAGCA GCCTGGATTG CAGATTAAAT ATCCAGCGCC ATTTGAGAGT
GTGCGCTTCT TTGATCGCCG TATTTTGACA ATCGATAATC CAGAGGCAGA GCGCTTTATT
ACTGCCGAAA AGAAAAACCT ATTGGTCGAC TCGTATGTGA AGTGGCGTAT TGTTGACCCG
CGCAAGTTCT TCATTAGCTT TAAGGGTGAT GAGCGTTTAG CACAAGATCG TCTTACTCAG
CTGGTACGTT CGGCTTTAAA TGAAGAGTTC ACTAAACGCA CTGTACGTGA GTTGATTTCT
GAGCAACGTG AAGAGGTGAT GCAGGGTATC CAGAAAAAAG TAGCTGTTGA TGCTTCGGAC
ATTGGTGTTG AGATTGTCGA TGTTCGTTTA AAGCGAGTTG ACTTGCTGGC AGAGATTAGT
GATTCGGTAT ATCGCCGTAT GGAGGCGGAG CGTAAGCGCG TAGCAAATGA ATTGCGCTCT
ATGGGTGCCG CAGAGTCTGA CAAGATACGT GCGAATGCAG AGCGTCAACG CGATACGATT
TTGGCTGAGG CTTATCGTGA TGCACAAAAA ATCAAAGGAG CCGGGGATGC CAAGGCAACC
GCGCTTTATG CTGAGGCATT TGGGCGTGAT CCCCAATTTG CTCAGTTCTA TCAAAGTCTT
GAGGCCTATC GCAATTCCTT TAAGGATAAG AAAGATGTGA TGGTGGTTGA GCCTAACGGC
GAGTTTTTCA AGTACCTGCA TAAAAAATAA
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| Protein sequence | MNKNRLIAAG IAFIALIYVL SSSIFIVDQR MFAVVFSFGQ IVRVIEQPGL QIKYPAPFES
VRFFDRRILT IDNPEAERFI TAEKKNLLVD SYVKWRIVDP RKFFISFKGD ERLAQDRLTQ
LVRSALNEEF TKRTVRELIS EQREEVMQGI QKKVAVDASD IGVEIVDVRL KRVDLLAEIS
DSVYRRMEAE RKRVANELRS MGAAESDKIR ANAERQRDTI LAEAYRDAQK IKGAGDAKAT
ALYAEAFGRD PQFAQFYQSL EAYRNSFKDK KDVMVVEPNG EFFKYLHKK
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