| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1277 |
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| Symbol | |
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| ID | 5053574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1346791 |
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| End bp | 1348023 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640471449 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001156055 |
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| Protein GI | 145589458 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACACAGC AATCCCACCT TTTTGAATCC ACCAAACAGG AGCGCTTTTT TCTCCTCGCG
TTATCTGGAA TTCAATTTAC CCATATTCTG GACTTTATGA TCATGATGCC TTTAGGGCCT
CAGTTCATAC AAGCATTGTC CATTAACACT CATCAGTTTG GCTTGTTACT TTCCTCTTAT
ACTTTTGCCG CTGCAATCGC AGGAGTGTTT GCAACCTATT ACATCGATCG GTTTGAGCGT
CGTACGCTTT TACTTCGCTT GTATATATGC TTCATTATTG CGACAGTAGC TTGCGGCTTT
GCACCCAATT ACCATACTCT ATTTTTTGCA CGCGCCTGTG CGGGAGCATT CGGTGGAATA
TTGGGCTCAC TGGTGCAGAC CATTGTTGCC GATTCGATTC CCTTTGAGCG CAGAGGAAAG
GCCCTGGGAA CAGTGATGGC CGCATTTTCT GTTTCAACAG TTGCCGGAGT TCCGCTCAGT
TTATTTTTAG CCAATCACAT TAGTTCTTTG GGTTGGCGTG CGCCATTTAT GTTTATTGGG
CTCATATCTC TTTTGATTCT CTATATCGCC TATCGCAATA TTCCACAGAT CTCTGGGCAT
TTACATCATG TGCAGGAGGG GAGTCGGTTT AAACAAATTT ATGAGGTATT GATTGCCCAT
CGCCATTTAC GCGCCTTTTT GTTCATTGGC TTGGTGATGA TGACTGGTTT TTCAGTTATC
CCTTATATCG CCCTATATCT CACTGCCAAT GTGGGTGTTG CTAACTCCTA CATTTCGCTC
ATCTACCTTT GCGGTGGTGT GGCCACCCTC ATGAGCTCAA GGTTTATTGG CCATATGGCG
GATAAGTTTG GCAAAGTAAG GGTGTTTCAA GTCTTAGCAA TTATTAGTCT GGCACCCATA
TTAATCACTA CCAATCTCGG CCCTGTTCCT CTGTGGATTG TCTTAATAAA CCAAACGGCA
TTCTTTATTT TGATCTCTGG CCGTATGATT CCAACGATGG CTATCGTAAG TCAAATGGTA
GAACCCAAGA TTCGAGGAAC ATTTATGAGT CTCGTTGGCT CAGTTCAAAT GTTAGCCTCG
GGTATAGCCT CGGTAGTAGC GGGTGCCGTG GTTACTATTG CAGCAGATGG CAAGATGGAG
CATTACAACT TAGTTGGATA TGGGGCAGCA GTGTGTGGCT TGCTCACATT CTGGCTGGTA
GGATATATTC ATTCCGATAC AAAAAAAGCA TAA
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| Protein sequence | MTQQSHLFES TKQERFFLLA LSGIQFTHIL DFMIMMPLGP QFIQALSINT HQFGLLLSSY
TFAAAIAGVF ATYYIDRFER RTLLLRLYIC FIIATVACGF APNYHTLFFA RACAGAFGGI
LGSLVQTIVA DSIPFERRGK ALGTVMAAFS VSTVAGVPLS LFLANHISSL GWRAPFMFIG
LISLLILYIA YRNIPQISGH LHHVQEGSRF KQIYEVLIAH RHLRAFLFIG LVMMTGFSVI
PYIALYLTAN VGVANSYISL IYLCGGVATL MSSRFIGHMA DKFGKVRVFQ VLAIISLAPI
LITTNLGPVP LWIVLINQTA FFILISGRMI PTMAIVSQMV EPKIRGTFMS LVGSVQMLAS
GIASVVAGAV VTIAADGKME HYNLVGYGAA VCGLLTFWLV GYIHSDTKKA
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