Gene Pnuc_1273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1273 
Symbol 
ID5053838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1344507 
End bp1344842 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content44% 
IMG OID640471445 
Productbranched-chain amino acid transport 
Protein accessionYP_001156051 
Protein GI145589454 
COG category[S] Function unknown 
COG ID[COG4392] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAATTG ATCTCAATAT TTATTTATTG ATTATTGGCA TGGCTTGGGT AACTGCATGG 
TCAAGAAGCT TCTTTTTGAT TTTGGGCGAG CACGTAAAGG TTCCGGATTG GGCGCTAGAG
GCAATTCGTT TTGCGCCTTT GGCGGCAATG GTAGCAATTT TGGCTCCGGA GATTTTTTTG
CCGGCTAGTG CTAGTAGCGT TGCCCAATTT AATCTCAGGC TGCCAAATAT TTGGGGAGGC
GTGGCGGCCA TCATTGCTTT TTATTTGACA CGAAAAATGC TCATTACCTT GATTGTTGGT
ATGGGTGTTT TTACCGCAGC CAGATTTTGG CTATAA
 
Protein sequence
MQIDLNIYLL IIGMAWVTAW SRSFFLILGE HVKVPDWALE AIRFAPLAAM VAILAPEIFL 
PASASSVAQF NLRLPNIWGG VAAIIAFYLT RKMLITLIVG MGVFTAARFW L