| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1270 |
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| Symbol | |
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| ID | 5053300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1339651 |
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| End bp | 1340406 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640471441 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_001156048 |
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| Protein GI | 145589451 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.907902 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAAA TATTAGTGGG TTTTCATGCG GTTCAAGCGC GCTTACGCGT TGACCCAGAT
AGTTTGAAGT CGGTGTATTT TGATCCCAGT CGTCGCGATC GACGCATGGG AGATTTCTTA
AAGCAAGCCG AAGAGATTTT GGGAGAGCGT TTGCATGCAG CTGATGCAGA GCGTCTTCAT
AAATTAGCGG GTCATGATCG ACACCAGGGA GTGGTCGCTC TTGCAGAAAA AATCACTGTT
GCTCGCACCA TCACTGAAGT GGTGGAAGAT GCAGAGAGTG CTCAGAAGAA ACCATTGTTC
TTGGTTTTAG ATGGTGTGAC TGATCCCCAT AACTTTGGCG CCTGCTTACG TGTTGCCGAT
GGTGCCGGCG TCGATGCGGT AGTCATTCCT AAGGATCGCT CTGCCTCTAT TAATGCCACT
GTCAGTAAGG TATCTAGTGG AGCTTCTGAG GTCATACCCG TTATTACCGT AACCAATCTT
GTGCGTAGCA TGAAAGAAAT GCAAGAGGCG GGTGTTTGGT TGGTGGGTAC CGATGATGAA
GCTGAGAAAT CTATCTACGA TCTTGATCTT ACCGGTCCTA TCGCTATTGT GATGGGGGCT
GAAGGTGAGG GTATGCGTCG TCTAACCCGT GAAACCTGTG ATGAGCTCGT ACGCATCCCT
ATGCAAGGTG TAGTAGAAAG CTTGAATGTT TCTGTAGCAA GTGGCGTATG CTTATATGAA
GCGCTTAGAC AGCGTCTTAC TAAAGTAGCG AAGTAA
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| Protein sequence | MKQILVGFHA VQARLRVDPD SLKSVYFDPS RRDRRMGDFL KQAEEILGER LHAADAERLH
KLAGHDRHQG VVALAEKITV ARTITEVVED AESAQKKPLF LVLDGVTDPH NFGACLRVAD
GAGVDAVVIP KDRSASINAT VSKVSSGASE VIPVITVTNL VRSMKEMQEA GVWLVGTDDE
AEKSIYDLDL TGPIAIVMGA EGEGMRRLTR ETCDELVRIP MQGVVESLNV SVASGVCLYE
ALRQRLTKVA K
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