| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1259 |
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| Symbol | |
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| ID | 5052195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1324778 |
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| End bp | 1325557 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640471430 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001156037 |
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| Protein GI | 145589440 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.226981 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCATA CAGTTTTTAT CCGTATTGCA GCCGTGCTTT TGCTCGGCTT TTTTTCCTTT
GGAATTAGTG CTCAGACGCC TGCGTGCAAT AAAACGGTTT ACCTCACTTT TGACACCGGC
AATATGTCAG TTGCACATAA AGTGGCGGAA ATACTGAAGC GCCAAAATGT AAAAGCAACT
TTTTTTCTCG CCAATGAAAA AACTTTTCGA GGTGACTTCG CCTTGGAAGA CTCATGGAAG
CCATTTTGGC AAGAGTTGGC TCATGAGGGT CATCACTTCG GTAGCCATAC CTATGATCAT
GATTACTTTG TGAAAGATGG CCCTAAGGGT GCGGTGTATG AAAAGCCGCA GTTTGGTCCA
AAGGCGGGGG AAACCATTCT CTACAACGAA GCGATGATGT GTAAGCAAAT TCGTCGTGTA
GATCAACGCT TTCAGGAAAT GACAAATCAG CCCCTACAAA GAATCTGGCG TGCACCTGGT
GGAAAAACCT CGCCTACATT AATTCGGATC GGCGATTTAT GTGGTTACCA ACATATTGGC
TGGGCACCCG CTGGTTTTTC AGGTGATGAA CTCAATTCTG ATCGTTATCC GAACGACGTT
TTATTAGCAA AGACCAGTCG AGATCTGGCT GATGGGGATA TTACGATGGC TCACCTAGGT
ATTTGGTCTC GGAAGGACCC ATGGGCCCCA GCTGTTTTGG AGCAGTTAAT TGCTAATCTC
AAGGGTCGCG GGTTTTGTTT TGGCTTACTG CCCAAAAATC CTACTAATCC ATCAAAATAA
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| Protein sequence | MSHTVFIRIA AVLLLGFFSF GISAQTPACN KTVYLTFDTG NMSVAHKVAE ILKRQNVKAT
FFLANEKTFR GDFALEDSWK PFWQELAHEG HHFGSHTYDH DYFVKDGPKG AVYEKPQFGP
KAGETILYNE AMMCKQIRRV DQRFQEMTNQ PLQRIWRAPG GKTSPTLIRI GDLCGYQHIG
WAPAGFSGDE LNSDRYPNDV LLAKTSRDLA DGDITMAHLG IWSRKDPWAP AVLEQLIANL
KGRGFCFGLL PKNPTNPSK
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