| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1258 |
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| Symbol | |
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| ID | 5053748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1323803 |
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| End bp | 1324774 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640471429 |
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| Product | putative transmembrane protein |
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| Protein accession | YP_001156036 |
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| Protein GI | 145589439 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3000] Sterol desaturase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.205212 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTCA ACGCCATCAC TTCAGCAATC TCTAGCGCTT ATGGAAGTGC TCAGGAGTGG
ATTTTTGCCG CGATCGTAGG ACCTATTCTT TATCAGTTTG ATTTAATGTC ATGGGCAGAA
GATGCGTTCG ACGGAATAGA TTGGTTTTTA TTTGGTTGCG TACAGATTTT CTTAATCATG
ATTGTTTTAA GGGTGTGGGA GCGCATTGCC CCTGCGGAAA CTCAAGAACG GTTTTCCTCT
TCTAGTAAGG CAGATCTTTT TTATACTTTT TTTCATCGCC TAGGAATATT TCATGGCTTG
ATGTTTATTG CACTTTCAGG ATTCTTTTTT GAGCTAGATT CCATCCTGCA TGACTTTCGC
TTTGATCGTC TCAATGTAGA GTCATGGTGG CCTGGGGTGA CCTCCATTCC TGTAGTGAGT
TTTGTGATTT ATCTCATCTT GCTCGATTTT GTTGATTATT TGTATCACCG CGCTTCACAT
ACGTTTAATT GGTGGTGGCA GTTACATACC TTGCACCATA GTCAAACCGT TATGACTGCT
TGGTCAGACA ATCGCAATCA CGTATTAGAT GACATCATGC GCACGACCTT GATGGCTTTC
TTCGCGCTAT TGTTTGGAGT ATCTCCCGGT CAATTCATCA TGCTGATTGC ATTAAGTCAA
TTTATTCAGA GCTGGCAGCA TGCCAATATC AAGGTTCATC TTGGTGCCGC AAGATTTGTA
TTGATTTCAC CGATGTATCA CCGCCTGCAC CATGCGGTAG GTTATGGACA TGAAGCAATT
GGTAAGCCAG GTGTTTTGGG TGGCTGTAAC TTTGGGATTT TGTTTCCTTG GTGGGATATG
CTTTTTAGCA CTGCAATCTT TCCAAAAGAG GTTTACCCCA CAGGCGTGCG AAACTTAACT
GTGTCTAATA ATGTGATTAC TCAGCAGTGG CAAGGTTTGG TACGTTCCGT TAAAGAATTA
TTGCCCAAAT AA
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| Protein sequence | MDFNAITSAI SSAYGSAQEW IFAAIVGPIL YQFDLMSWAE DAFDGIDWFL FGCVQIFLIM
IVLRVWERIA PAETQERFSS SSKADLFYTF FHRLGIFHGL MFIALSGFFF ELDSILHDFR
FDRLNVESWW PGVTSIPVVS FVIYLILLDF VDYLYHRASH TFNWWWQLHT LHHSQTVMTA
WSDNRNHVLD DIMRTTLMAF FALLFGVSPG QFIMLIALSQ FIQSWQHANI KVHLGAARFV
LISPMYHRLH HAVGYGHEAI GKPGVLGGCN FGILFPWWDM LFSTAIFPKE VYPTGVRNLT
VSNNVITQQW QGLVRSVKEL LPK
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