Gene Pnuc_1257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1257 
Symbol 
ID5053805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1322903 
End bp1323772 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content46% 
IMG OID640471428 
Productputative transmembrane protein 
Protein accessionYP_001156035 
Protein GI145589438 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.243356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGGAT TGCAACAGGT GGTGAAGTCT TTTGGGTTAG CGCTCGTAGG AACGATGCAC 
CCCAGAATGC TCTGGCTCAG TTTGCGACCA TTTTTGATCG TGTCAATTTT GTGGGGATGT 
CTGATTTGGT TGACGTGGAC GCCCGCCTTA GAAATGCTGA GCATCTTTCT TACTAATTCC 
ATCTTTACCA GTTGGATTCA AGACGGGTTG ATTTGGGCTG GCTTTGAAAA TGCGAGAGCA 
TGGATTGCCC CTTTATTTTT TGTAATGCTG ATCATTCCTT TGATCACCAT TAGTCTCTTA 
GTTTTTATTG CTTTTACTAC CGTGCCTGCA ATCGTGAATA TTGTTGCAAG ACAGGCCGGG 
TATCAAGGCC TAGAAATTAA ACGGGGTGGG GGCTTTTGGG GAAGTCTGGT TTACACACTT 
TGGTCTGCTT TGCTTTGTTT GGTCTTGGTG ATATTGACGC TACCGGTTTG GTGGTTGCCA 
CCCCTCGTAG CAGTATTGCC TCCGCTACTT TGGGGATGGT TAACCATGCG CCTCATGTCG 
TATGACGTGC TGGCGAAACA TGCGAGCTCC CAAGAGCGAG ATTTATTATT GGAAAAATAC 
CGTTGGCCCT TATTGTGTAT GGGTATAGCC TCAGGCATGC TGGGCGCAGT TCCTACCTTC 
TTTTGGGCTA CTTCAGCGCT AGCATTGGTT TTGTTTCCGA TTGTCAGCTT TGTGGCGTTG 
TGGATCTATT CCTTAATTTT TGTCTTTGCT GCCTTATGGT TTAGTCACTT CTTGCTCGAT 
GCATTAAAAA CATTGCGCCA ACAAGAATTG GATAAAGCCT TAACAGTAGA AACTCGTGTA 
ATTGATTTGG AGCTTCCGTA CCATGGTTGA
 
Protein sequence
MIGLQQVVKS FGLALVGTMH PRMLWLSLRP FLIVSILWGC LIWLTWTPAL EMLSIFLTNS 
IFTSWIQDGL IWAGFENARA WIAPLFFVML IIPLITISLL VFIAFTTVPA IVNIVARQAG 
YQGLEIKRGG GFWGSLVYTL WSALLCLVLV ILTLPVWWLP PLVAVLPPLL WGWLTMRLMS 
YDVLAKHASS QERDLLLEKY RWPLLCMGIA SGMLGAVPTF FWATSALALV LFPIVSFVAL 
WIYSLIFVFA ALWFSHFLLD ALKTLRQQEL DKALTVETRV IDLELPYHG