| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1250 |
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| Symbol | |
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| ID | 5053932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1315274 |
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| End bp | 1316560 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640471422 |
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| Product | transposase IS116/IS110/IS902 family protein |
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| Protein accession | YP_001156029 |
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| Protein GI | 145589432 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3547] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0325438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGACC ACTTAAACAA TAAACCCTTT GGGGCATGGA TTGCAATCGA TATTGCCAAG
GACTTTAATG CCGTGTTAAG CGAGACCAAG GCGGGTAAAA GGCAGCATTT TCGGATGGCT
AATTCTGCTG CCGATCATGA TCGTTTTATT GCTTTTCTAA AGAGCTTACC GCCGCCTTGC
ATTATTGGGT TTGAGGCAAC CGGCAATTAC CACCGCGCAT TAGGGCATCG CTTGGTAGCG
GCGGGGTTTG AAGTCTGTTT TATTTCCTCG GTAGCGAGCG CCCGGTATCG GGAGGTGATG
TTCAACTCCT GGGATAAAAA TGATCCCAAG GATGCTGCAG TGCTTTTAGA GCTGCTTAAG
CAAGGGATTA CTCAACGTTA TGTTGACCCA TTAATTGCAG GGCATCATGA TCTCCAAGAG
TTATCTAAAA CCTACTATCA AGTGACCTTG AGTCGCACGC GCCTGCAGCA TTCCATCCTC
ACTCATTACC TGCCTTTGTA TTTTCCGGAG ATGGGTAAAT GGTGGAACAG TACTCGCGCA
GACTGGTGGA TTAATTATCT TTTGCGCTTC CCCATCCCTA GCGCAGTAAC GAAGCACTCT
CAAGAAGCGT TTTGCGAGAT TGCCAGCCCT GTCATTGGCC GCAAGGTTAA TAAAGCGGCT
AAGCTTATTG AGCTCTATGA GACCGCCTTG CATAGCATTG GACTACCTGT TGAGGCAGAT
TCCTTGGCTT GCAAAACCTT TCAAATACAA CTGAGACGCT ATCAAGAGAT CAATGCTTGT
CGCAAGCAAT TAGAAGAGAC GGCTCAAGCA GTATTGGCCG ATAACCCGGA CTCTGCCATC
TTGCAAAGTG TTCCGGGGAT TGGCCCGATT AATGCCCTAA CGATTCTGGC GGAAGGCGGG
GATCTACGTC GCTTTAGCCA TCATCGTCAG TTCTTGAAGT ATTGTGGGTT TGATCTAGCC
AAAAATCAAT CAGGCAACTA TCGTGGTCAA GAACAAATCT CCAAACGAGG TAATGCGCGT
TTACGTTTGG CGTTATGGAT GGCAGTGAAC ACTGCTATCG CTCAACCAGA AAATAGTTTC
CAGCAAAAAT ATAGCCGCTA TATTAAAGGC GCACCACAGG ATAAGGATTT ACAGCGCAAG
GCTAGGACTG CGGTGGCAGC GAAGATGGCG CGTGTAGTGT ATGGATTAGT GAAGTCAAAA
CAGATGTATC AAGGTTACTA TGAAAAAGCT TTACCCAGTG GATCGATCCC TCTCTGTAGG
GCCGTAGAGG CCGCAAGGAC CTCGTAG
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| Protein sequence | MADHLNNKPF GAWIAIDIAK DFNAVLSETK AGKRQHFRMA NSAADHDRFI AFLKSLPPPC
IIGFEATGNY HRALGHRLVA AGFEVCFISS VASARYREVM FNSWDKNDPK DAAVLLELLK
QGITQRYVDP LIAGHHDLQE LSKTYYQVTL SRTRLQHSIL THYLPLYFPE MGKWWNSTRA
DWWINYLLRF PIPSAVTKHS QEAFCEIASP VIGRKVNKAA KLIELYETAL HSIGLPVEAD
SLACKTFQIQ LRRYQEINAC RKQLEETAQA VLADNPDSAI LQSVPGIGPI NALTILAEGG
DLRRFSHHRQ FLKYCGFDLA KNQSGNYRGQ EQISKRGNAR LRLALWMAVN TAIAQPENSF
QQKYSRYIKG APQDKDLQRK ARTAVAAKMA RVVYGLVKSK QMYQGYYEKA LPSGSIPLCR
AVEAARTS
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