| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1243 |
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| Symbol | |
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| ID | 5052831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1307651 |
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| End bp | 1308499 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640471415 |
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| Product | HpcH/HpaI aldolase |
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| Protein accession | YP_001156022 |
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| Protein GI | 145589425 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2301] Citrate lyase beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.31934 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCAC TAGAAACGTC TTTAGGCTTT AGTACTAATT TTTTATTTGT TCCTGGCACT
CGCCCGGAAC GTTTTATCAA GGCGCTAGAG AGTGGTGCAA GCGGCGTGGT ATTAGATTTA
GAGGATGCGG TCGCAGAAGA AGATAAAGAA GCTGCCAGAG ATGCAATTCG CACGGCATGG
CCAAATTTTT CGGATGAACA AAAGAAGCAC TTAGTCATTC GAACGAATGC CCCCGGCACA
AAGTTCTATT CCAAAGATTT GATTTTGGCG CAAGAGTTAA AAGTGGGCTG CTTATTAATT
CCGAAAAGTG AATCACTCGA TCAGATTAAT GGTGCCGCAA TGATATTACC TAACACTGCC
ATTATTCCGA TGATTGAAAG TGCCATTGGA TTGGATTGTC TGCGCGAAAT TGCTAACGCT
AACCAAGTAC TCCGTCTTGC TCTGGGAAAT TTAGATTTAC AAGCTGACCT GGGCATGGTG
TGCGACGCAC AAGAATCTGA ATTACAGTTT GCTCGATATC AAATTGTGTT GGCCTCGCGT
GTCGCTCAAA TTGCCCCTCC TATTGATGGG GTTACACCAT CTACTGATGA TCTACCCCGT
ATTACTCAAG ATGCAGAGCG CGCTAAACGC ATCGGCTTTG GTGGGAAGCT ATGCATACAC
CCCATACAAG TGGCAGCTGT GCAAGCGGCA TTTATGCCTA CGGCAGAAGA ACTCAGCTGG
GCCCAAAGAG TGGTCGAGGC CGATCAGGCC TCTAGCGGTG GTGTAGCGAA GCTAGATGGA
CGAATGATTG ACCGTCCCGT GGTCTTGCTA GCCAAAAGAA CGCTTGCTGT TGCTGGTAAA
CACCAATAA
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| Protein sequence | MNPLETSLGF STNFLFVPGT RPERFIKALE SGASGVVLDL EDAVAEEDKE AARDAIRTAW
PNFSDEQKKH LVIRTNAPGT KFYSKDLILA QELKVGCLLI PKSESLDQIN GAAMILPNTA
IIPMIESAIG LDCLREIANA NQVLRLALGN LDLQADLGMV CDAQESELQF ARYQIVLASR
VAQIAPPIDG VTPSTDDLPR ITQDAERAKR IGFGGKLCIH PIQVAAVQAA FMPTAEELSW
AQRVVEADQA SSGGVAKLDG RMIDRPVVLL AKRTLAVAGK HQ
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