Gene Pnuc_1243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1243 
Symbol 
ID5052831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1307651 
End bp1308499 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content47% 
IMG OID640471415 
ProductHpcH/HpaI aldolase 
Protein accessionYP_001156022 
Protein GI145589425 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.31934 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCCAC TAGAAACGTC TTTAGGCTTT AGTACTAATT TTTTATTTGT TCCTGGCACT 
CGCCCGGAAC GTTTTATCAA GGCGCTAGAG AGTGGTGCAA GCGGCGTGGT ATTAGATTTA
GAGGATGCGG TCGCAGAAGA AGATAAAGAA GCTGCCAGAG ATGCAATTCG CACGGCATGG
CCAAATTTTT CGGATGAACA AAAGAAGCAC TTAGTCATTC GAACGAATGC CCCCGGCACA
AAGTTCTATT CCAAAGATTT GATTTTGGCG CAAGAGTTAA AAGTGGGCTG CTTATTAATT
CCGAAAAGTG AATCACTCGA TCAGATTAAT GGTGCCGCAA TGATATTACC TAACACTGCC
ATTATTCCGA TGATTGAAAG TGCCATTGGA TTGGATTGTC TGCGCGAAAT TGCTAACGCT
AACCAAGTAC TCCGTCTTGC TCTGGGAAAT TTAGATTTAC AAGCTGACCT GGGCATGGTG
TGCGACGCAC AAGAATCTGA ATTACAGTTT GCTCGATATC AAATTGTGTT GGCCTCGCGT
GTCGCTCAAA TTGCCCCTCC TATTGATGGG GTTACACCAT CTACTGATGA TCTACCCCGT
ATTACTCAAG ATGCAGAGCG CGCTAAACGC ATCGGCTTTG GTGGGAAGCT ATGCATACAC
CCCATACAAG TGGCAGCTGT GCAAGCGGCA TTTATGCCTA CGGCAGAAGA ACTCAGCTGG
GCCCAAAGAG TGGTCGAGGC CGATCAGGCC TCTAGCGGTG GTGTAGCGAA GCTAGATGGA
CGAATGATTG ACCGTCCCGT GGTCTTGCTA GCCAAAAGAA CGCTTGCTGT TGCTGGTAAA
CACCAATAA
 
Protein sequence
MNPLETSLGF STNFLFVPGT RPERFIKALE SGASGVVLDL EDAVAEEDKE AARDAIRTAW 
PNFSDEQKKH LVIRTNAPGT KFYSKDLILA QELKVGCLLI PKSESLDQIN GAAMILPNTA
IIPMIESAIG LDCLREIANA NQVLRLALGN LDLQADLGMV CDAQESELQF ARYQIVLASR
VAQIAPPIDG VTPSTDDLPR ITQDAERAKR IGFGGKLCIH PIQVAAVQAA FMPTAEELSW
AQRVVEADQA SSGGVAKLDG RMIDRPVVLL AKRTLAVAGK HQ