| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1236 |
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| Symbol | |
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| ID | 5052154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1299149 |
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| End bp | 1300213 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640471408 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001156015 |
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| Protein GI | 145589418 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4174] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCACCT ACATCTTTAA GCGTTTGCTG CTGATGATCC CAACGCTTTT GGGTGTATTG
ACCTTGACTT TTGCTGTTGT GCAATTTGTG CCTGGTGGAC CAGTAGAGCA AATGGTGCTC
GAGTTAAAGG GCAAGGGAAG TGCCGCGGTA GGAGGCTCAG AATCTTCTGG AGGCGGTGCT
ACATATCGTG GTCGCCAAGG AGTGGATGCA CAGCGACTCG AAGAGGTGAA AGCCTTGTAT
GGCTTTGATA AGCCACCATT AGAGCGTTAC TTCATGATGT TGGGTCGCTT CGCGCGCTTT
GATTTAGGGC AGAGCTACTA TCAACACGAA AGCGTCTGGC GCTTAGTAGT TTCTAAATTG
CCTGTTTCTA TCAGTATTGG TTTGTGGACA TTCTTTATTA CGTACTTGGT GTCTATTCCA
CTGGGTATTG CAAAGGCGGT TAGAGATGGC TCTCGTTTTG ATTCTGTCAC GAGCACGATG
ATCTTAGTCG GTTATGCCAT CCCAGGATTT GTACTCGGCG TCTTGCTACT GGTGATTTTT
GGTGGTGGTA GTTTTTTGCA AATCTTTCCC CTGCGGGGCC TCACGTCAGA TAATTGGAGC
GATCTTAGTC TGATAGGCAA GGTAATGGAC TATTTATGGC ATCTGGTTTT ACCTATTACC
GCTTCAGTAC TGGGGAGTTT TGCAGTTGTC ACCATGCTCA CCAAGAACTC ATTTTTAGAA
GAGATTCGTA AGCAATACGT TTTAACAGCA AGGGCAAAAG GATTGGCTGA GAGACAAGTG
CTTTGGAAGC ACGTCTTCAG AAATGCCATG CTCCCTTTGG TAACCGGCTT TCCGGCTGCT
TTTATTGGCG CTTTTTTTAC GGGTTCCTTG CTAATCGAAA CCTTATTCTC TTTAGATGGA
CTTGGTTTGC TCTCTTATGA ATCCGTCATG CGACGCGATT ACCCAGTAGT GTTTGGAACT
TTGTATTTAT TTACCTTAAT TGGTTTATTT ACTAAATTAA TTTCTGATCT TTGTTATGTC
TATGTTGACC CGCGTATTCA GTTTGGATCT GGGGGCGGCT CATGA
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| Protein sequence | MRTYIFKRLL LMIPTLLGVL TLTFAVVQFV PGGPVEQMVL ELKGKGSAAV GGSESSGGGA
TYRGRQGVDA QRLEEVKALY GFDKPPLERY FMMLGRFARF DLGQSYYQHE SVWRLVVSKL
PVSISIGLWT FFITYLVSIP LGIAKAVRDG SRFDSVTSTM ILVGYAIPGF VLGVLLLVIF
GGGSFLQIFP LRGLTSDNWS DLSLIGKVMD YLWHLVLPIT ASVLGSFAVV TMLTKNSFLE
EIRKQYVLTA RAKGLAERQV LWKHVFRNAM LPLVTGFPAA FIGAFFTGSL LIETLFSLDG
LGLLSYESVM RRDYPVVFGT LYLFTLIGLF TKLISDLCYV YVDPRIQFGS GGGS
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